review of GOanalysis for gene expression data

[Fiona McCarthy]

Hi All,

Olivier mentioned that a review of GO analysis software/sites would be
very beneficial. There was a review of GO functional profiling tools
published last year:

"Ontological analysis of gene expression data: current tools, limitations,
and open problems."
Purvesh Khatri, Sorin Draghici
http://bioinformatics.oxfordjournals.org/cgi/reprint/bti565v1

My understanding is that this review is not meant to be all encompassing
but the authors do discuss 14 gene expression analysis tools in detail.

regards,
Fiona


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From: Olivier Gandrillon <[
nospamhere:gandrillon at cgmc.univ-lyon1.fr?Subject=Re:%20[Chicken-genome]%20Re:%20chicken%20GO%20proposal
]gandrillon at cgmc.univ-lyon1.fr> 
Date: Sun Mar 26 2006 - 23:14:52 PST

May I suggest that a comparative, updated and critical analysis of the 
wealth of existing GO analysis softwares/sites would be very beneficial? 
Best regards 
Olivier