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review of GOanalysis for gene expression data
Fiona McCarthy
fmccarthy at cvm.msstate.edu
Wed Mar 29 06:59:09 PST 2006
Hi All,
Olivier mentioned that a review of GO analysis software/sites would be
very beneficial. There was a review of GO functional profiling tools
published last year:
"Ontological analysis of gene expression data: current tools, limitations,
and open problems."
Purvesh Khatri, Sorin Draghici
http://bioinformatics.oxfordjournals.org/cgi/reprint/bti565v1
My understanding is that this review is not meant to be all encompassing
but the authors do discuss 14 gene expression analysis tools in detail.
regards,
Fiona
AgBase Biocurator
Department of Basic Sciences
Box 6100
MS 39762-6100
Mississippi State University
USA
Tel: (+ 1) 662 325 5859
Fax: (+ 1) 662 325 1031
http://www.agbase.msstate.edu/
From: Olivier Gandrillon <[
nospamhere:gandrillon at cgmc.univ-lyon1.fr?Subject=Re:%20[Chicken-genome]%20Re:%20chicken%20GO%20proposal
]gandrillon at cgmc.univ-lyon1.fr>
Date: Sun Mar 26 2006 - 23:14:52 PST
May I suggest that a comparative, updated and critical analysis of the
wealth of existing GO analysis softwares/sites would be very beneficial?
Best regards
Olivier
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