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Use of deprecated GO IDs in current gene association tables

Fritz Roth froth at hms.harvard.edu
Thu Nov 15 15:57:13 PST 2001


Hi All,

In the latest version of sgd, mgi, and fb gene association tables from
ftp://ftp.geneontology.org/pub/go/gene-associations/ there is the use of 
one or more deprecated GO IDs:

In gene_association.fb
The following deprecated IDs are used:
0003710
0019006
0017167
0016940
0008461
0018999
In addition there are three cases where a GO ID has a typo (extra '0'):
00058924
00036763
00057622

In gene_association.sgd
The following deprecated ID is used:
0015237

In gene_association.mgi
The following deprecated ID is used:
0006632

Thanks!
Fritz Roth
-------------------------------------------------
Frederick P. Roth, Asst. Professor
Harvard Medical School
Dept. of Biological Chemistry and Molecular Pharmacology
250 Longwood Avenue, SGMB-322, Boston, MA 02115
(617) 432-3551 phone            (617) 432-3557 FAX
froth at hms.harvard.edu           http://llama.med.harvard.edu
-------------------------------------------------

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