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Use of deprecated GO IDs in current gene association tables

David Hill dph at informatics.jax.org
Fri Nov 16 05:05:27 PST 2001


This has been fixed at MGI. It will be in the next update.

David


At 06:57 PM 11/15/01 -0500, Fritz Roth wrote:
>Hi All,
>
>In the latest version of sgd, mgi, and fb gene association tables from
>ftp://ftp.geneontology.org/pub/go/gene-associations/ there is the use of 
>one or more deprecated GO IDs:
>
>In gene_association.fb
>The following deprecated IDs are used:
>0003710
>0019006
>0017167
>0016940
>0008461
>0018999
>In addition there are three cases where a GO ID has a typo (extra '0'):
>00058924
>00036763
>00057622
>
>In gene_association.sgd
>The following deprecated ID is used:
>0015237
>
>In gene_association.mgi
>The following deprecated ID is used:
>0006632
>
>Thanks!
>Fritz Roth
>-------------------------------------------------
>Frederick P. Roth, Asst. Professor
>Harvard Medical School
>Dept. of Biological Chemistry and Molecular Pharmacology
>250 Longwood Avenue, SGMB-322, Boston, MA 02115
>(617) 432-3551 phone            (617) 432-3557 FAX
>froth at hms.harvard.edu           http://llama.med.harvard.edu
>-------------------------------------------------
>
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