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Evidence type "NA" in gene_association.mgi?

Judy Blake jblake at informatics.jax.org
Thu Sep 27 06:42:47 PDT 2001


yes, we will update this.
Have also implemented the TaxonID prefix fix.

Judy



At 05:47 PM 9/26/01, Fritz Roth wrote:
>Sorry I missed that in the evidence descriptions.  So it looks like MGD 
>should update this to NAS for consistency, but in the meantime I now know 
>what to do with them....
>
>Thanks!
>Fritz
>
>At 02:45 PM 9/26/2001 -0700, you wrote:
>>Hi Fritz,
>>
>>Oddly, I am looking at the GO evidence codes right now (though for a
>>different reason)
>>
>>The GO.evidence.html document explains NA under NAS. Here is the
>>relevant bit of text:
>>
>>"NAS non-traceable author statement
>>
>>Database entries that don't cite a paper (e.g. SwissProt records, YPD
>>protein reports) Statements in papers (abstract, introduction, or
>>discussion) that a curator cannot trace to another publication
>>Comment: Formerly NA (not available). See TAS, and see notes
>>below. Also, note that "author" can be interpreted quite loosely for
>>this code--for example, one doesn't have to know which curator entered
>>an untraceable statement that appears on a database record to use this
>>code"
>>
>>-Karen
>>
>>
>>
>>On Wed, 26 Sep 2001, Fritz Roth wrote:
>>
>> > Hi All,
>> >
>> > The current MGD gene association file contains the evidence type
>> > "NA".  There is no evidence type of this name among the evidence types
>> > listed on www.geneontology.org.  I'm guessing it corresponds to either 
>> "NR"
>> > or "NAS", but I can't tell which.  Anyone?
>> >
>> > Thanks,
>> > Fritz Roth
>> > -------------------------------------------------
>> > Frederick P. Roth, Asst. Professor
>> > Harvard Medical School
>> > Dept. of Biological Chemistry and Molecular Pharmacology
>> > 250 Longwood Avenue, SGMB-322, Boston, MA 02115
>> > (617) 432-3551 phone            (617) 432-3557 FAX
>> > froth at hms.harvard.edu           http://llama.med.harvard.edu
>> > -------------------------------------------------
>> >
>> >
>> > --
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>> >
>
>
>--
>This message is from the GOFriends moderated mailing list.  A list of public
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