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olivier at nlm.nih.gov
Mon Jun 10 05:45:26 PDT 2002
I do not know any graph visualization tool doing a good job at drawing a
readable picture of 10,000 nodes. It probably becomes challenging with a
few hundred nodes.
However, a sliding window on the graph may sometimes provide good results
(from a cognitive point of view, I mean), assuming that the user is able to
move the window dynamically.
I have started to develop a graphical browser for the GO database. It has
most of the features I wanted, but it has not been tested yet. This is why
I prefer to answer off list. You are welcome to try it (at your own risks!)
if you wish. Any suggestions and comments are welcome.
-- Dr. Olivier Bodenreider
National Library of Medicine (LHC/CgSB)
8600 Rockville Pike - MS 43 (Bldg 38A, B1N28U)
Bethesda, MD 20894 -- USA
phone : (301) 435-3246
fax : (301) 480-3035
Thierry Lombardot writes:
> Dear GO-friends,
> I'm looking for a large picture representing all (or most) GO terms and
> their relationships, in the form of a printable tree/map for example.
> Did someone create such a representation of GO with the current status
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