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GO process associations available for all S. cerevisiae proteins

Kara Dolinski kara at genome.Stanford.EDU
Fri Oct 4 09:31:44 PDT 2002


Hello,

Every S. cerevisiae protein is now associated with a biological process 
term (or terms) from the Gene Ontology (GO).  GO associations for 
individual gene products are displayed on every SGD locus page.  In 
addition, you can download the GO associations for the entire S. 
cerevisiae genome on the SGD or GO ftp site.  The complete set of 
process annotations makes the GO Term Finder and GO Term Mapper tools at 
SGD even more useful.  As always, let us know if you have any 
suggestions or comments.

Relevant URLs:

SGD ftp directory:
ftp://genome-
ftp.stanford.edu/pub/yeast/data_download/literature_curation/

GO ftp directory:
ftp://ftp.geneontology.org/pub/go/gene-associations/

GO Term Mapper (maps granular GO terms used to describe a group of genes 
to more general GO terms):
http://genome-www4.stanford.edu/cgi-bin/SGD/GO/goTermMapper

GO Term Finder (finds common GO terms used to describe a group of genes):
http://genome-www4.stanford.edu/cgi-bin/SGD/GO/goTermFinder

SGD GO Tutorial (introduction to using GO in SGD):
http://genome-www.stanford.edu/Saccharomyces/help/gotutorial.html

Cheers,
Kara
*****************************************************
  Kara Dolinski, Database Curator/Developer
  Saccharomyces Genome Database
  Stanford University Med. Ctr.
  Department of Genetics
  Stanford, CA 94305-5120 USA
  phone: (650)725-8956  fax: (650)723-7016
  e-mail:   kara at genome.stanford.edu
  WWW:   http://genome-www.stanford.edu/
*****************************************************


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