Search Mailing List Archives


Limit search to: Subject & Body Subject Author
Sort by: Reverse Sort
Limit to: All This Week Last Week This Month Last Month
Select Date Range     through    

eVOC expression ontologies data update

Janet Kelso janet at sanbi.ac.za
Fri Dec 19 06:38:19 PST 2003


SANBI, in collaboration with Electric Genetics announces the
availability of eVOC v1.4, a controlled vocabulary for describing the
source of samples used in gene expression experiments.
The ontologies are incorporated into the Ensembl Datamart, EnsMart,
(http://www.ensembl.org/EnsMart/) and will continue to be released in
synch with ENSmart.

Both the ontologies and the ontology-annotated cDNA libraries, with
associated ESTs, can be retrieved from http://www.sanbi.ac.za/evoc/.

Users are encouraged to use the eVOC ontologies and to modify and adapt
them as required for their own research.
Comments, questions about, and contributions to eVOC can be posted to
the eVOC mailing list  - evoc at sanbi.ac.za

Ontologies     (http://www.sanbi.ac.za/evoc/ontologies.html)
-----------
The four orthogonal controlled vocabularies for describing the sample
source of materials used in gene expression experiments have been
updated and expanded.

Annotations     (http://www.sanbi.ac.za/evoc/annotations.html)
------------
A total of 8258 human cDNA libraries (Genbank freeze 138: 10 December 
2003) have been curated and annotated with eVOC terms across all four 
ontologies.



Reference:
Kelso J et al. eVOC: a controlled vocabulary for unifying gene
expression data. Genome Res. 2003 Jun;13(6A):1222-30.



Regards
Janet











--
This message is from the GOFriends moderated mailing list.  A list of public
announcements and discussion of the Gene Ontology (GO) project.
Problems with the list?           E-mail: owner-gofriends at geneontology.org
Subscribing   send   "subscribe"   to   gofriends-request at geneontology.org
Unsubscribing send   "unsubscribe"  to  gofriends-request at geneontology.org
Web:          http://www.geneontology.org/



More information about the go-friends mailing list