go and pfam

[Arnaud Kerhornou]

Venky

If you only have Pfam accession numbers, you can map them first to 
interpro ids using protein2ipr.dat file from interpro ftp web site, then 
do a mapping between interpro ids and GO terms, using interpro2go file.
This is what we did for the tse-tse fly ESTs annotations.

Arnaud

tvvenk wrote:

>Is there any association of go terms with pfam? where can I find it.
>Thanks
>Venky
>
>  
>


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