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Microbial Structure Ontology Project

Chandra Theesfeld chandra at genome.Stanford.EDU
Fri May 9 07:49:29 PDT 2003


Hi there

We have made a link to the microbial structure ontology project from the
current GOBO page:
http://www.geneontology.org/doc/gobo.html

The ontology is also in the gobo/anatomy.ontology/ directory (with a
README). I understand that when the OBO site is up at SourceForge that the
ontologies in gobo/ will be moved to OBO.

If the new website has a section for "What's New" and GO decides to
announce new ontology projects - we'd love the visibility!

Thanks
Chandra

On Fri, 9 May 2003, Jane Lomax wrote:

> 
> I presume Michael will add this ontology to GOBO (or is it OBO now?) so I 
> don't think we need to have it directly linked from the GO website,
> 
> jane
> 
> 
> 
> On Fri, 9 May 2003, Jennifer Clark wrote:
> 
> > 
> > Is it useful for you to have this linked from the GO web site?
> > 
> > http://www.ebi.ac.uk/~jenclark/goweb/GO.new.ontologies.html
> > 
> >  I can't add it to the current web site but I can incorporate it into the copy that I'm 
> > modifying:
> > 
> > http://www.ebi.ac.uk/~jenclark/goweb/GO.home.html
> > 
> > Let me know what you think.
> > 
> > Thanks,
> > 
> > Jen
> > 
> > 
> > 
> > 
> > On Thu, 8 May 2003, Chandra Theesfeld wrote:
> > 
> > > 
> > > Hi
> > > 
> > > This is an announcement to let you know that the greater fungal community
> > > has begun to construct a microbial structure ontology. The ontology
> > > contains terms that can be used to describe structures made by fungi and
> > > other microbes.
> > > 
> > > This project is formally called the Microbial Structure Ontology
> > > Project.
> > > 
> > > The website for this project is:
> > > 
> > > http://www.geneontology.org/doc/microbial_structure_ontology/
> > > 
> > > The website contains information on ontologies and their structure,
> > > guidelines for suggesting terms for the ontology, and information on
> > > subscribing and unsubscribing to the e-mail list. You will also find the
> > > Microbial Structure Ontology (MSO) itself (follow the "View Ontology and
> > > Definitions" link). You will find that the current ontology is very basic.
> > > The growth of the project relies on the contributions of specialists to
> > > make the ontology robust, complete and useful to all researchers. 
> > > 
> > > There is an email list for public discussion between MSO developers;
> > > fungal-ontology at genome.stanford.edu If you are interested in participating
> > > in this project, or if you would like to suggest terms to be added to the
> > > ontology, please send a message to the fungal-ontology email list. (You
> > > must subscribe first; directions are below).
> > > 
> > > Three curators at the Saccharomyces Genome Database (SGD) are
> > > currently the main contacts for this project: Chandra Theesfeld, Eurie
> > > Hong, and Maria Costanzo. Initially, we three will mediate the
> > > discussion on the fungal-ontology list and edit the MSO ontology and
> > > definition files. If you or someone you know would like to be involved
> > > in these tasks, we will arrange to include them in the future.
> > > 
> > > Sincerely,
> > > Chandra,
> > > Eurie, and
> > > Maria
> > > 
> > > ***********************************************************************
> > > To subscribe, please send a message to:
> > > fungal-ontology-request at genome.stanford.edu
> > > with the text "subscribe" in the body of the message.
> > > 
> > > To unsubscribe, please send a message to:
> > > fungal-ontology-request at genome.stanford.edu
> > > with the text "unsubscribe" in the body of the message.
> > > 
> > > 
> > > 
> > > 
> > > 
> > > --
> > > This message is from the GOFriends moderated mailing list.  A list of public
> > > announcements and discussion of the Gene Ontology (GO) project.
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> > > Web:          http://www.geneontology.org/
> > > 
> > 
> > --
> > EMBL - European Bioinformatics Institute 
> > and Wolfson College, Cambridge.
> > http://www.ebi.ac.uk/~jenclark/
> > 
> > 
> > 
> > --
> > This message is from the GOFriends moderated mailing list.  A list of public
> > announcements and discussion of the Gene Ontology (GO) project.
> > Problems with the list?           E-mail: owner-gofriends at geneontology.org
> > Subscribing   send   "subscribe"   to   gofriends-request at geneontology.org
> > Unsubscribing send   "unsubscribe"  to  gofriends-request at geneontology.org
> > Web:          http://www.geneontology.org/
> > 
> 
> 
> 



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