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ATTN GOA: QuickGO Update

Evelyn Camon camon at ebi.ac.uk
Fri Oct 31 02:58:09 PST 2003


Hi,

The QuickGO browser at the EBI has been updated and serach queries
should now work more
efficiently thanks to John Maslen.

Here is a summary of what has changed:

Search GO term names/synonyms
Find GO terms where the name and/or synonym contains the search term,
e.g. 'cytoplasm' is found in 'Cytoplasmic streaming'. If the search term
contains more than one word, the search pattern involves individual
words and word combinations. Please note: GO terms with a 'relevance
score' of >50% only are displayed.

Exact GO term name
Go straight to the GO Term page given a GO term name. If an exact name
is not found, then a 'Search GO term names/synonyms' is carried out by
default.

Comments
Search for GO Terms which contain a particular word or phrase in their
comment field.

Search all text
QuickGO terms are searched by name, synonym, definition, SwissProt
keyword and GO:ID.

This search returns only the most relevant search results- these are
entries with a score of >50%. GOA (assignment of GO terms to protein) is
searched by SwissProt accession.

If you notise anything strange or would like to suggest further
improvements please let
us know.

cheers
Evelyn
(goa at ebi.ac.uk)



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