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Drawing GO hierarchical trees

Keith Decker decker at
Tue Jun 22 07:52:25 PDT 2004

On Tuesday, June 22, 2004, at 10:20  AM, Nigam Shah wrote:

> Hi!
> Given a list of GO-ids belonging to any one category
> (processs,function,component), is there an easy way to draw the (HTML)
> hierarchical tree for those terms?

We use AT&T's Graphviz for our display in GOFigure,
a service for drawing graphs of blast hits on GO-annotated genes
(and suggesting an IEA annotation):

For some purposes you might be able to use our service (the results can 
be saved locally), but
the code is available as well, contact Gang Situ <situ at>.

Associate Professor                                |  email: 
decker at
Computer and Information Sciences   |  phone: 302-831-1959
University of Delaware                           |  fax: 302-831-4091
Newark, DE   19716                                |

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