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[Go-database] TIGR database annotations to GO
jclark at ebi.ac.uk
Fri Mar 26 06:49:50 PST 2004
Would you like to have the tool listed on the GO website?
Mike Bada wrote:
> Hello Anand and GO people,
> Here at the University of Manchester, we're working on a project called
> the Gene Ontology Annotation Tool (GOAT), which aims to guide users in
> the annotation of gene products with GO terms by suggesting the GO terms
> that are most likely to be relevant based on the information (other GO
> terms and gene-product type) that the user has already entered for a
> given gene product. The terms suggested by the tool are mostly
> determined by relying upon a large store of GO-term-to-GO-term
> associations that we have mined from GOA and represented in a
> description-logic-based formalism. If you're further interested, there
> will be a GOAT paper appearing in the June issue of SIGMOD Record, which
> will be a special issue on data engineering in the life sciences. Or
> you can check out the project's Web site at http://goat.man.ac.uk (which
> right now has some outdated information but which I'll update over the
> At 05:41 PM 3/22/2004 +0100, Anand Kumar wrote:
>> I am using annotations of TIGR gene products present within the
>> association table of GO to find association between GO terms.
>> Can someone please send me a write-up in few lines which describes
>> which kinds of gene products present within TIGR databases are present
>> within association table of GO database.
>> Is someone doing a related work?
>> Kind Regards,
>> Anand Kumar MBBS, PhD
>> Faculty of Medicine
>> University of Leipzig
>> HÃ¤rtelstraÃŸe 16-18
>> 04107 Leipzig
>> Go-database mailing list
>> Go-database at mail.fruitfly.org
> Go-database mailing list
> Go-database at mail.fruitfly.org
EMBL - European Bioinformatics Institute,
Gene Ontology Consortium,
and Wolfson College, Cambridge.
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