GO Biological process breakdown of a very large list of genes

[Dopazo.Joaquin]

Or you can even try FatiGO :-)
http://www.fatigo.org

> -----Mensaje original-----
> De: Fritz Roth [mailto:froth at hms.harvard.edu]
> Enviado el: viernes, 03 de septiembre de 2004 4:29
> Para: Obi Griffith
> CC: gofriends at genome.stanford.edu
> Asunto: Re: GO Biological process breakdown of a very large list of
> genes
> 
> 
> You might also try FuncAssociate ( 
> http://llama.med.harvard.edu/cgi/func/funcassociate )
> 
> Fritz Roth
> 
> At 06:31 PM 9/2/2004 -0700, Erich Schwarz wrote:
> >On Thu, 2 Sep 2004, Obi Griffith wrote:
> >
> > > Is anyone aware of a tool that can tell me how many genes from a
> > > very large genelist belong to each biological process annotation
> > > at a general level.  I want to get an understanding of the
> > > composition of a geneset I've produced in terms of biological
> > > processes.  Any pointers are greatly appreciated.
> >
> >     It might be worth trying GoMiner:
> >
> >     http://discover.nci.nih.gov/gominer/index.jsp
> >
> >
> >--Erich
> >
> >
> >--
> >This message is from the GOFriends moderated mailing list.  
> A list of public
> >announcements and discussion of the Gene Ontology (GO) project.
> >Problems with the list?           E-mail: 
> owner-gofriends at geneontology.org
> >Subscribing   send   "subscribe"   to   
> gofriends-request at geneontology.org
> >Unsubscribing send   "unsubscribe"  to  
> gofriends-request at geneontology.org
> >Web:          http://www.geneontology.org/
> 
> ____________________________________
> Frederick P. "Fritz" Roth, Asst. Professor
> Harvard Medical School
> Biological Chemistry and Molecular Pharmacology
> 250 Longwood Avenue, SGMB-322, Boston, MA 02115
> phone:(617) 432-3551   mailto:froth at hms.harvard.edu
> fax:  (617) 432-3557   http://llama.med.harvard.edu
> ____________________________________________________ 
> 
> 
> --
> This message is from the GOFriends moderated mailing list.  A 
> list of public
> announcements and discussion of the Gene Ontology (GO) project.
> Problems with the list?           E-mail: 
> owner-gofriends at geneontology.org
> Subscribing   send   "subscribe"   to   
> gofriends-request at geneontology.org
> Unsubscribing send   "unsubscribe"  to  
> gofriends-request at geneontology.org
> Web:          http://www.geneontology.org/
> 
> 


--
This message is from the GOFriends moderated mailing list.  A list of public
announcements and discussion of the Gene Ontology (GO) project.
Problems with the list?           E-mail: owner-gofriends at geneontology.org
Subscribing   send   "subscribe"   to   gofriends-request at geneontology.org
Unsubscribing send   "unsubscribe"  to  gofriends-request at geneontology.org
Web:          http://www.geneontology.org/