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[Go-database] Ole AmiGO

Mike Cherry cherry at genome.Stanford.EDU
Thu May 5 11:32:48 PDT 2005


My apologies to Brad Marshall.  I attributed the development of AmiGO 
to the wrong Brad.  Brad Marshall is the author of AmiGO.

-Mike


On May 5, 2005, at 9:08 AM, Shuly Avraham wrote:

> Thanks Mike!
>
> That's great "news" - we like working with Chris and Shu :-)
> And yes, Brad was a great help too.
>
> Shuly.
>
> Mike Cherry wrote:
>
>> Dear Shuly,
>>
>> Chris, Shu or Suzanna will likely have more to add on this topic.
>>
>> Brad Sherman is the author of the AmiGO software, Brad changed 
>> careers  and is no longer with the project.  Shu had been the person 
>> supporting  AmiGO since Brad left.  Chris has always been great at 
>> helping everyone  with everything.  Chris and Shu are still 
>> developers for the GO  resources.  The biggest change is that the 
>> production site serving up  the godatabase and AmiGO is now hosted 
>> from SGD.   SGD is thus now  involved in supporting these tools, but 
>> we are still learning.
>>
>> So for now if Chris has been your contact I would stay with him until 
>>  you hear from Chris.  We'll be sharing the support tasks between  
>> Berkeley and Stanford so there is no need to change at this moment.
>>
>> -Mike
>>
>>
>> On May 5, 2005, at 7:56 AM, Shuly Avraham wrote:
>>
>>> Hi,
>>>
>>> I'm Shuly from POC.
>>> First, I want to thank Chris Mungall so so much - he has been a  
>>> wonderful help!
>>>
>>> As you might know, at POC we have a local copy of AmiGO connecting 
>>> to  our own database.
>>> We communicate with Chris (mostly) quite frequently in regards to  
>>> "special needs" of the POC or "software improvements" we would like 
>>> to  implement and sometimes encounter problems we need help with.
>>>
>>> Who will be the best contact person to continue this "relationship" ?
>>> Will Chris still be mainteining the API ?
>>> Which mailing list is the best to work with for this purpose ?
>>>
>>> Sorry if I'm asking questions that have already been answered.
>>> Thanks and Good luck!
>>> Shuly.
>>>
>>>
>>> Mike Cherry wrote:
>>>
>>>> Happy Cinco de Mayo.
>>>>
>>>> The AmiGO and the services from the godatabase.org domain are not  
>>>> provided from the SGD project at Stanford.
>>>>
>>>> The go-database list remains at go-database at mail.fruitfly.org
>>>>
>>>> The SourceForge site for AmiGO requests is still:
>>>>
>>>>    https://sourceforge.net/tracker/? 
>>>> atid=494390&group_id=36855&func=browse
>>>>
>>>> For bugs reports on AmiGO or access to the godatabase.org domain  
>>>> please send info on the problem to:
>>>>
>>>>    sgd-programmers at genome.stanford.edu
>>>>
>>>> Thanks to everyone at SGD for their work over the last six months 
>>>> to  move AmiGO into production.  In particular, thanks to  
>>>> Anand,Sethuraman, Stuart Miyasato, Gail Binkley, Christopher Lane 
>>>> and  Shuai Weng.
>>>>
>>>> Also thanks to Chris Mungall, ShengQiang Shu and Suzanna Lewis for  
>>>> all there fine work for the past years creating these resources in  
>>>> the first place.  Chris and ShengQiang are still very much involved 
>>>>  in new developments for AmiGO and the GO Consortium's public  
>>>> resources.
>>>>
>>>> -Mike
>>>>
>>>>
>>>> J. Michael Cherry, Ph.D.         Internet: 
>>>> cherry at genome.stanford.edu
>>>> Associate Professor (Research)   Department of Genetics
>>>> Medical Center, Room M341        Leland Stanford Junior University
>>>> Voice:    650-723-7541           Stanford, California  94305-5120
>>>> FAX:      650-725-1534           
>>>> http://genetics.stanford.edu/~cherry
>>>>
>>>> _______________________________________________
>>>> Go-database mailing list
>>>> Go-database at mail.fruitfly.org
>>>> http://mail.fruitfly.org/mailman/listinfo/go-database
>>>
>>>
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>>
>>


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