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Pie Chart view of Gene Ontology percentages

Nathan Salomonis nsalomonis at
Tue May 17 16:54:04 PDT 2005


I was wondering if anyone new of a program that will take an input set of
genes, for example a whole dataset, that is divided into groups (e.g.
clusters) and not only identify over-represented GO terms in each cluster
put generate a graphical pie chart showing the percentages of high level GO
terms aligning with that cluster? Several genome annotation papers display
this type of output; however I'm not sure if there is a program that
generates this type of display.

Nathan Salomonis
University of California, San Francisco
Pharmaceutical Sciences and Pharmacogenomics

GenMAPP (Gene Map Annotator and Pathway Profiler)

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