Search Mailing List Archives


Limit search to: Subject & Body Subject Author
Sort by: Reverse Sort
Limit to: All This Week Last Week This Month Last Month
Select Date Range     through    

Pie Chart view of Gene Ontology percentages

Magic Fang fangl at genomics.org.cn
Thu May 19 17:22:14 PDT 2005


hi, nathan,

Our GO tool named WGOP at http://wgop.genomics.org.cn seems useful for 
you althought its output is a histogram instead of pie chart. 
Any suggestion from you are welcome.

>Greetings,
>
>I was wondering if anyone new of a program that will take an input set of
>genes, for example a whole dataset, that is divided into groups (e.g.
>clusters) and not only identify over-represented GO terms in each cluster
>put generate a graphical pie chart showing the percentages of high level GO
>terms aligning with that cluster? Several genome annotation papers display
>this type of output; however I'm not sure if there is a program that
>generates this type of display.
>
>Thanks,
>Nathan Salomonis
>University of California, San Francisco
>Pharmaceutical Sciences and Pharmacogenomics
>
>GenMAPP (Gene Map Annotator and Pathway Profiler)
>http://www.genmapp.org
>
>
>
>--
>This message is from the GOFriends moderated mailing list.  A list of public
>announcements and discussion of the Gene Ontology (GO) project.
>Problems with the list?           E-mail: owner-gofriends at geneontology.org
>Subscribing   send   "subscribe"   to   gofriends-request at geneontology.org
>Unsubscribing send   "unsubscribe"  to  gofriends-request at geneontology.org
>Web:          http://www.geneontology.org/
>
>
>  
>


--
This message is from the GOFriends moderated mailing list.  A list of public
announcements and discussion of the Gene Ontology (GO) project.
Problems with the list?           E-mail: owner-gofriends at geneontology.org
Subscribing   send   "subscribe"   to   gofriends-request at geneontology.org
Unsubscribing send   "unsubscribe"  to  gofriends-request at geneontology.org
Web:          http://www.geneontology.org/



More information about the go-friends mailing list