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January 2006 GOA release

Daniel Barrell dbarrell at ebi.ac.uk
Fri Jan 13 07:43:15 PST 2006


January 2006: GOA releases.
=============================

GOA (GO Annotation at EBI) is a project run by the European Bioinformatics
Institute that aims to provide assignments of gene products to the Gene
Ontology (GO) resource.

The data can be obtained via:

           EBI FTP: ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/

           EBI SRS: http://srs.ebi.ac.uk. Search GOA data library

           GO FTP: ftp://ftp.geneontology.org/pub/go/gene-associations/

           GO CVS: http://www.geneontology.org/GO.CVS.help.html

For further information read: http://www.ebi.ac.uk/GOA
or contact goa at ebi.ac.uk.

GOA News update:
*****************
This release includes an increase in Human interaction data from IntAct 
because they curated the large scale human interaction sets of Stelzl et 
al and Rual et al.

Changes in the association file include the addition of InterPro and 
HAMAP Ids as well as EC numbers into the 'with' db column.

IEA assignments using the InterPro2GO have increased despite some SMART 
hits not being included in the release this time due to improvements in 
status ranking within InterPro.

Happy New Year from the UniProt GOA Team

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