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looking for an expression analysis tool

Sorin Draghici sorin at
Tue Jun 13 08:05:08 PDT 2006


Sure. The new version of Onto-Express will do this, at the usual  :-)

The user will be able to upload a file with custom annotations, as a 
simple text file, one annotation per line, using standard GO terms. This 
version is now is final beta testing, we plan to release it next week.



Jane Lomax wrote:
> Hi - does anyone devevelop, or know of, a gene expression analysis 
> tool that uses GO, and allows a user to upload their own gene 
> association file, preferably in standard GO format?
> This is useful for species with no GO annotation in the GO database.
> many thanks,
> Jane

Sorin Draghici, Ph.D. 

Director of the Bioinformatics Core, Karmanos Cancer Institute

Associate Professor		Tel: (313) 577-5484
Dept. of Computer Science	Fax: (313) 577-6868
Wayne State University
5143 Cass Ave, Room 431 State Hall, 
Detroit, MI, 48202
WWW: (personal)
WWW: (lab)

Check out my recent book: Data Analysis Tools for Microarrays:

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