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June 2006 GOA release
Daniel Barrell
dbarrell at ebi.ac.uk
Tue Jun 27 08:45:22 PDT 2006
June 2006: GOA releases
=======================
GOA (GO Annotation at EBI) is a project run by the European Bioinformatics
Institute that aims to provide assignments of gene products to the Gene
Ontology (GO) resource.
The data can be obtained via:
EBI FTP: ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/
EBI SRS: http://srs.ebi.ac.uk. Search GOA data library
GO FTP: ftp://ftp.geneontology.org/pub/go/gene-associations/
GO CVS: http://www.geneontology.org/GO.CVS.help.html
For further information read: http://www.ebi.ac.uk/GOA
or contact goa at ebi.ac.uk.
GOA News update:
*****************
The PDB Gene Association file has new identifiers for columns 2 and 3.
This used to contain the PDB ID and chain respectively. The identifier
will now be written as 'PDBid_chain' (e.g. '1OA2_C') and will populate
both columns. The new file is located here (and will be the version the
GO ftp site):
ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/PDB/gene_association.goa_pdb.gz
There is also a version of the file using the old identifiers here:
ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/PDB/gene_association.goa_pdb_OLD.gz
This file will not be made again.
Regards
The UniProt GOA Team
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