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API for AmiGO in R?

Eurie Hong eurie at genome.Stanford.EDU
Mon Feb 26 20:28:54 PST 2007


Dear Chi-Wai,

I'm forwarding your question to the GO-friends mailing list to see if  
anyone is aware of any resources that could help you.

Alternatively, you could download the relevant datasets instead of  
exporting the data from AmiGO:

http://www.geneontology.org/GO.current.annotations.shtml

Cheers,
Eurie

*******************************************
Eurie L. Hong, Ph.D.
Scientific Curator
Saccharomyces Genome Database: http://www.yeastgenome.org/
Gene Ontology: http://www.geneontology.org/
*******************************************


Begin forwarded message:

> From: noreply at genome.stanford.edu
> Date: February 22, 2007 4:01:37 PM PST
> To: Chi-WaiL at alleninstitute.org
> Subject: GO Help query (from website)
>
> contactName: Chi-Wai Lau
> contactEmail: Chi-WaiL at alleninstitute.org
> contactText: Researchers at Allen Institute for Brain Science are  
> extensive users of AmiGO. We often acquire data from AmiGO and  
> perform indepth analysis in R. However, we have to export our data  
> from the web browser and then import it back to R. Is there  
> actually a simple API available for us to access the AmiGO data  
> directly in R?
>
> Thank you.


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