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[gofriends] GO visualisation tool?

Jim Hu jimhu at tamu.edu
Thu Jan 10 07:52:35 PST 2008


Hi Rachael,

I'm not sure I understand what the user wants to do.  Doesn't AmiGO  
place genes under the appropriate branches based on annotations?  Is  
this not the desired kind of visualization?  Or do they want something  
different?

Jim


On Jan 10, 2008, at 7:46 AM, Rachael Huntley wrote:

> Dear all,
>
> I have had this query from a user, does anyone know of a tool that  
> can do this?
>
> >Do you know of any GO viewer that allows you to visualise the  GO  
> structure and place genes with a specific annotation under that   
> branch of the tree?
> <
>
> Thanks,
> Rachael.
>
> -- 
> Rachael Huntley Ph.D.
>
> European Bioinformatics Institute-EMBL
> Wellcome Trust Genome Campus
> Hinxton
> Cambridge CB10 1SD
> United Kingdom
> Tel: +44 (0)1223 492515
> Fax: +44 (0)1223 494468
>
> E-mail: huntley at ebi.ac.uk
> URL: http://www.ebi.ac.uk/GOA
>
>
> --
> This message is from the GOFriends moderated mailing list.  A list  
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=====================================
Jim Hu
Associate Professor
Dept. of Biochemistry and Biophysics
2128 TAMU
Texas A&M Univ.
College Station, TX 77843-2128
979-862-4054


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