Search Mailing List Archives


Limit search to: Subject & Body Subject Author
Sort by: Reverse Sort
Limit to: All This Week Last Week This Month Last Month
Select Date Range     through    

[Gofriends] GO tool for semantic similarity

Erick Antezana erant at psb.ugent.be
Mon Oct 13 07:45:44 PDT 2008


Phillip Lord wrote:
>   
>>>>>> "IF" == Iddo Friedberg <idoerg at gmail.com> writes:
>>>>>>             
>
>   IF> There are various measures of semantic similarity using the GO
>   IF> DAG. The most commonly used is Lord's:
>
>   IF> http://bioinformatics.oxfordjournals.org/cgi/content/abstract/19/10/1275
>
>   IF> But there are others. See the citing papers.
>
>
> ...which I borrowed from Philip Resnik who applied it to word net. 
>
> Alas, I never managed to produce a website which did this. It's hard to
> do this sort of thing as a service without the infrastructure (well,
> that's my excuse). 
>
> I think that there is an implementation in bioconductor (the R based
> stats package). There may be others. 
>
> Phil
>   
another interesting paper:

http://bioinformatics.oxfordjournals.org/cgi/content/full/24/2/265

Erick



More information about the go-friends mailing list