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[Gofriends] GOA release [2009-07-30]
tonys at ebi.ac.uk
Thu Jul 30 08:25:59 PDT 2009
GOA releases: 30 July 2009
GOA (GO Annotation at EBI) is a project run by the European Bioinformatics Institute
that provides assignments of gene products to the Gene Ontology (GO) resource.
The data can be obtained via:
EBI FTP: ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/
EBI SRS: http://srs.ebi.ac.uk. Search GOA data library
GO FTP: ftp://ftp.geneontology.org/pub/go/gene-associations/
GO CVS: http://www.geneontology.org/GO.CVS.help.html
For further information read: http://www.ebi.ac.uk/GOA or contact
goa at ebi.ac.uk.
Important News about changes to the GOA release procedure
Please note that GOA is intending to stop production of the gene_association.goa_uniprot_slimmed.gz file after this release.
Annotations to GO slims can now be generated using GOA's QuickGO tool http://www.ebi.ac.uk/QuickGO).
QuickGO provides a range of features to help users to create GO slims and map annotations; the tool also
integrates pre-defined slims, including the GOA slim.
Information on QuickGO's annotation slimming facilities is available at:
http://www.ebi.ac.uk/QuickGO/GMultiTerm and http://www.ebi.ac.uk/QuickGO/tutorial.html
Other files provided in the goa/goslim/ ftp directory will continue to be maintained.
Please contact us if you have any concerns regarding this change in the GOA release procedure.
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