Search Mailing List Archives


Limit search to: Subject & Body Subject Author
Sort by: Reverse Sort
Limit to: All This Week Last Week This Month Last Month
Select Date Range     through    

[Gofriends] GOA release [2009-07-30]

Tony Sawford tonys at ebi.ac.uk
Thu Jul 30 08:25:59 PDT 2009


GOA releases: 30 July 2009
==========================

GOA (GO Annotation at EBI) is a project run by the European Bioinformatics Institute 
that provides assignments of gene products to the Gene Ontology (GO) resource.

The data can be obtained via:

           EBI FTP: ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/

           EBI SRS: http://srs.ebi.ac.uk. Search GOA data library

           GO FTP: ftp://ftp.geneontology.org/pub/go/gene-associations/

           GO CVS: http://www.geneontology.org/GO.CVS.help.html

For further information read: http://www.ebi.ac.uk/GOA or contact
goa at ebi.ac.uk.


Important News about changes to the GOA release procedure
=========================================================

Please note that GOA is intending to stop production of the gene_association.goa_uniprot_slimmed.gz file after this release. 
<ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/goslim/gene_association.goa_uniprot_slimmed.gz>

Annotations to GO slims can now be generated using GOA's QuickGO tool http://www.ebi.ac.uk/QuickGO). 
QuickGO provides a range of features to help users to create GO slims and map annotations; the tool also 
integrates pre-defined slims, including the GOA slim. 

Information on QuickGO's annotation slimming facilities is available at: 
http://www.ebi.ac.uk/QuickGO/GMultiTerm and http://www.ebi.ac.uk/QuickGO/tutorial.html

Other files provided in the goa/goslim/ ftp directory will continue to be maintained. 

Please contact us if you have any concerns regarding this change in the GOA release procedure.


Regards,
GOA Production





More information about the go-friends mailing list