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[Gofriends] Need a software to map GO annotation

Erika Feltrin erika.feltrin at cribi.unipd.it
Mon Sep 28 01:46:57 PDT 2009


Dear all,

I am working on the grape annotation project and in particular on the GO
annotation of grape genes/proteins. 
Currently I have a list of genes annotated to GO vocabularies and I
would like to visualize these genes on the DAG GO structure like AmiGO
does.
The file has a column with the grape gene ID and a column with the GO
ID.
I do not find any tool with this function. Does anybody know if there is
a software that allows to map custom GO annotation of a non-consortium
organism to the GO DAG graph?

Thanks
Erika


-- 
********************************
Erika Feltrin, PhD
Bioinformatics Lab
CRIBI-Padua University
Viale G. Colombo, 3
35121 Padova-Italy

http://genomics.cribi.unipd.it
Phone. +39. 049 827-6165
Fax.   +39. 049 827-6159
********************************




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