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[Gofriends] UniProtKB-GOA release [2011-05-04]

Tony Sawford tonys at ebi.ac.uk
Wed May 4 07:52:50 PDT 2011


UniProtKB-GOA release: 04 May 2011
==================================

UniProtKB-GOA (UniProtKB GO Annotation at EBI) is a project run by the 
European Bioinformatics Institute that provides assignments of gene 
products to the Gene Ontology (GO) resource.

The data can be obtained via:

           EBI FTP: ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/

           EBI SRS: http://srs.ebi.ac.uk. Search GOA data library

           GO FTP: ftp://ftp.geneontology.org/pub/go/gene-associations/

           GO CVS: http://www.geneontology.org/GO.CVS.help.html

For further information read: http://www.ebi.ac.uk/GOA or contact
goa at ebi.ac.uk.

Latest News
===========

UniProtKB-GOA now incorporates annotations from external groups that use 
a GO reference (GO_REF) or a MOD-specific reference that can be 
converted to an equivalent GO_REF using the mappings defined in 
http://www.geneontology.org/doc/GO.references in their reference field. 
Previously, UniProtKB-GOA only accepted annotations that used a PubMed 
identifier in this field.

An example of a GO_REF that we are now accepting is GO_REF:0000015 'Use 
of the 'No biological data' (ND) evidence code for Gene Ontology terms'.
A description and complete list of the GO_REFs available can be found at 
http://www.geneontology.org/cgi-bin/references.cgi.

Regards,
UniProtKB-GOA Production



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