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[go-friends] GO subgraph visualization

Rachael Huntley huntley at ebi.ac.uk
Fri Feb 3 09:27:06 PST 2012


Hi Monica,

You can use the EBI GO browser QuickGO (www.ebi.ac.uk/QuickGO) to view a 
list of GO terms.

On the front page, click on the term basket icon in the top menu bar. 
Paste your list of GO terms into the text box and then click on 'Add 
terms'. Now click on the button 'Display terms in ancestor chart'. This 
will produce a chart of your selected GO terms and how they are related 
to each other.

If you need further help with QuickGO, please email us at goa at ebi.ac.uk.

I hope this helps.

Best wishes,
Rachael.

On 03/02/2012 16:27, Monica Chagoyen wrote:
> Hi,
>
> Does anybody know a visualization tool to represent a GO subgraph 
> containing a user-defined GO list of terms?
>
> Thanks in advance,
>
> Mónica


-- 
Senior Scientific Curator
UniProt-GOA
European Bioinformatics Institute
Wellcome Trust Genome Campus
Hinxton
Cambridge, CB10 1SD
UK

Email: huntley at ebi.ac.uk
GOA: http://www.ebi.ac.uk/GOA
http://twitter.com/emblebi




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