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[go-friends] GO subgraph visualization

Seth Carbon sjcarbon at lbl.gov
Fri Feb 3 10:46:24 PST 2012


On 02/03/2012 08:27 AM, Monica Chagoyen wrote:
> Hi,
> 
> Does anybody know a visualization tool to represent a GO subgraph
> containing a user-defined GO list of terms?

Mónica,

There is also the AmiGO visualization tool for arbitrary subsets:

  http://amigo.geneontology.org/cgi-bin/amigo/visualize?mode=client

It can also take a format for self-defined labels, colors, etc.

Best wishes,

-Seth



> Thanks in advance,
> 
> Mónica



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