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[go-friends] Shared GO terms between protein pairs

Jane Lomax jane at ebi.ac.uk
Thu Mar 22 03:23:13 PDT 2012


Could anyone recommend a tool for this user please?

thanks,

Jane

>
> Respected Sir/Madam,
> I am currently working on a task that requires me to assess the shared 
> GO terms between protein pairs. I have 30,000 protein pairs (PPI data) 
> and I would like to determine the depth/level in the GO hierarchy that 
> each protein pair shares. I am unable to determine which GO 
> tool/software is suitable for this task. Could you please suggest what 
> method I could employ to achieve this goal.
>
> Your support and response in this matter shall be highly appreciated.
> Thanking you.
>
> Sincerely,
> Saloni



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