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[go-friends] UniProt-GOA release [2014-07-10]

Tony Sawford tonys at ebi.ac.uk
Thu Jul 10 03:49:18 PDT 2014


UniProt-GOA release: 10 July 2014
=================================

UniProt-GOA (UniProt GO Annotation) is a project run by the UniProt
group that provides assignments of gene products to the Gene Ontology
(GO) resource.

The data can be obtained via:

          EBI FTP: ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/

          GO FTP: ftp://ftp.geneontology.org/pub/go/gene-associations/

          GO SVN: http://www.geneontology.org/GO.svn.help.shtml

For further information read: http://www.ebi.ac.uk/GOA or contact
goa at ebi.ac.uk.

Latest News
===========

In this release we have improved the accuracy of automatic annotations
by removing those annotations that violate taxon constraints. Some GO
terms are applicable only to certain taxa and this is encoded in the GO
taxon constraints. For example, if a GO term that is valid for use only
with eukaryotes, e.g. GO:0000165 'MAPK cascade', is applied to a
bacterial protein, the annotation would be incorrect and it would be
deleted.

This process has resulted in the deletion of approximately 106,000
incorrect electronic annotations.

Regards,
UniProt-GOA Production


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