Search Mailing List Archives
[go-friends] Obsoletion notice: grouping terms of pattern 'x from other organism during symbiotic interaction'
Pascale Gaudet
Pascale.Gaudet at sib.swiss
Tue Nov 2 03:38:21 PDT 2021
Dear all,
The proposal has been made by the multiorganism working group to obsolete grouping terms of pattern 'x from other organism during symbiotic interaction'. The reason for obsoletion is that these represent unnecessary grouping classes, we propose to split the host/symbiont process higher in the ontology, at
'biological process involved in interaction with host'
'biological process involved in interaction with symbiont'
and remove all intermediate grouping classes:
GO:0051801 cytolysis in other organism involved in symbiotic interaction
GO:0051883 killing of cells in other organism involved in symbiotic interaction
GO:0051818 disruption of cells of other organism involved in symbiotic interaction
GO:0051802 regulation of cytolysis in other organism involved in symbiotic interaction
GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction
GO:0052185 modification of structure of other organism involved in symbiotic interaction
GO:0052497 occlusion by organism of xylem in other organism involved in symbiotic interaction
GO:0051803 negative regulation of cytolysis in other organism involved in symbiotic interaction
GO:0051804 positive regulation of cytolysis in other organism involved in symbiotic interaction
GO:0052188 modification of cellular component in other organism involved in symbiotic interaction
GO:0052339 disruption by organism of cell wall of other organism involved in symbiotic interaction
GO:0052332 modification by organism of membrane in other organism involved in symbiotic interaction
GO:0052333 modification by organism of cell wall of other organism involved in symbiotic interaction
GO:0052230 modulation of intracellular transport in other organism involved in symbiotic interaction
GO:0052495 occlusion by organism of vascular system in other organism involved in symbiotic interaction
GO:0052334 modification by organism of cytoskeleton of other organism involved in symbiotic interaction
GO:0052368 disruption by organism of cellular component in other organism involved in symbiotic interaction
GO:0052095 formation of specialized structure for nutrient acquisition from other organism involved in symbiotic interaction
GO:0052313 modulation of nutrient release from other organism involved in symbiotic interaction
GO:0052520 positive regulation by organism of nutrient release from other organism involved in symbiotic interaction
GO:0051817 modulation of process of other organism involved in symbiotic interaction
GO:0052205 modulation of molecular function in other organism involved in symbiotic interaction
GO:0052204 negative regulation of molecular function in other organism involved in symbiotic interaction
GO:0044657 pore formation in membrane of other organism during symbiotic interaction
GO:0051816 acquisition of nutrients from other organism during symbiotic interaction
GO:0052312 modulation of transcription in other organism involved in symbiotic interaction
GO:0052331 hemolysis in other organism involved in symbiotic interaction
There are 2 annotations and 1 InterPro mapping to these terms
InterPro: https://github.com/geneontology/go-annotation/issues/3972
CACAO: https://github.com/geneontology/go-annotation/issues/3971
CDG: https://github.com/geneontology/go-annotation/issues/3970
You can comment on the ticket: https://github.com/geneontology/go-ontology/issues/22343
Thanks, Pascale
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.stanford.edu/pipermail/go-friends/attachments/20211102/5f84dfa5/attachment-0001.html>
More information about the go-friends
mailing list