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[go-helpdesk] Visualization GO Help query
paola at ebi.ac.uk
Tue Jun 26 05:10:30 PDT 2012
Thank you for contacting GO.
The Gene Ontology web site hosts a collection of ontology visualization
Starred tools are those whose listings have been updated recently;
non-starred tools may be unsupported or may no longer be active.
For example, you may choose AmiGO:
Click on "Tools & Resources" at the top of the page, then click on
"Visualization" from the list of "Other Tools and Resources in AmiGO".
Detailed instructions to use this tool can be found here:
A comprehensive list of Gene Ontology tools can be found here:
Please feel free to contact us again if you have any more queries.
With best regards,
Paola Roncaglia, for GO help.
> GO Help query (from website)
> scuesta at ebi.ac.uk
> Mon, 25 Jun 2012 11:28:05 -0700
> go-helpdesk at mailman.stanford.edu
> Email:scuesta at ebi.ac.uk
> Name: Tools (from Sergio Martinez Cuesta)
> Text: Hi GO:
> I'm interested on visualization of the 10 most common GO terms annotated to a particular class of proteins.
> I already obtained them but I need suggestions on how to nicely represent them in a graph or bubble plot.
> Do you have any suggestion that might be useful for me please?
> many thanks
Dr Paola Roncaglia
GO Editorial Office
Wellcome Trust Genome Campus
p: +44 1223 492600
f: +44 1223 494468
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