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[go-ontology] GO:0044387 "negative regulation of protein kinase activity by regulation of protein phosphorylation"
cjmungall at lbl.gov
Tue Dec 20 12:44:29 PST 2011
I went ahead and removed the logical definition.
GO is back to a blue ball in Jenkins:
The first TG1 commit also went through fine
On Dec 17, 2011, at 8:46 AM, Jane Lomax wrote:
> Yep - was from this SF item:
> in retrospect it's obvious that xp wouldn't work - I'm not having a good week! I'll remove the xp.
> On 16/12/2011 20:48, Chris Mungall wrote:
>> Was this term intentional?
>> with the current logical definition, it's inferred to be equivalent to:
>> GO:0006469 "negative regulation of protein kinase activity"
>> Which could potentially cause various downstream problems in the reasoning.
>> Sorry, I didn't think through the regulation-by pattern. In retrospect it's obvious problem like this would show up.
>> I suggest removing the logical definition for this term for now and manually classifying it.
>> The simplest short-medium term solution is to introduce a sub-relation of regulates, I think.
>> Maybe a good exercise for the workshop.
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