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[protege-discussion] Export error

Bo De Lange bodelange at gmail.com
Tue Sep 25 04:35:43 PDT 2007


Hi there,

thanks for the 3.4 beta release and all the improvements it contains. Much
appreciated.
Anxious to try out the new native owl writer on export, we ran into the
following error message:

Export failed: edu.stanford.smi.protege.util.MessageError at b59a10.

The following error log was generated:

cwd: C:\Program Files (x86)\Protege\Protege_3.4_beta\

cmd: "C:\Program Files (x86)\Protege\Protege_3.4_beta\jre\bin\java.exe"
-Xms1000

00000 -Xmx1100000000 -classpath "C:\Program Files
(x86)\Protege\Protege_3.4_beta

\protege.jar;C:\Program Files (x86)\Protege\Protege_3.4_beta\looks-2.1.3.jar
;C:\

Program Files (x86)\Protege\Protege_3.4_beta\unicode_panel.jar;C:\Program
Files

(x86)\Protege\Protege_3.4_beta\driver.jar;C:\Program Files
(x86)\Protege\Protege

_3.4_beta\driver0.jar;C:\Program Files
(x86)\Protege\Protege_3.4_beta\driver1.ja

r;C:\Program Files (x86)\Protege\Protege_3.4_beta\driver2.jar;C:\Program
Files (

x86)\Protege\Protege_3.4_beta\plugins\edu.stanford.smi.protegex.changes\change-m

odel.jar;C:\Program Files (x86)\Protege\Protege_3.4_beta\lax.jar;"
com.zerog.lax

.LAX "C:/Program Files (x86)/Protege/Protege_3.4_beta/Protege.lax"
"C:/Documents

 and Settings/Henk-Jan/Local Settings/Temp/lax364.tmp"

CONFIG: Protege 3.4 Build 104, JVM 1.5.0_11-b03, memory=1092M, Windows 2003,
enc

oding=UTF-8, language=nl, country=NL

CONFIG: Loaded plugin edu.stanford.smi.protegex.owl - OWL Plugin

CONFIG: Loaded plugin ca.uvic.cs.chisel.jambalaya - Jambalaya

CONFIG: Loaded plugin dfki.protege.ontoviz

CONFIG: Loaded plugin edu.stanford.smi.protegex.rdf_backend - RDF Backend

CONFIG: Loaded plugin edu.stanford.smi.protegex.changes - Changes tab

CONFIG: Loaded plugin edu.stanford.smi.protegex.chatPlugin

CONFIG: Loaded plugin edu.stanford.smi.protege.collab - Collaborative
Protege

CONFIG: Loaded plugin edu.stanford.smi.protege.script - Script Plugin

CONFIG: Loaded plugin edu.stanford.smi.protegex.standard_extensions - Graph
Widg

et, Table Widget

CONFIG: Loaded plugin edu.stanford.smi.protege.stringsearch - String Search
Tab

CONFIG: Loaded plugin edu.stanford.smi.protegex.datamaster - DataMaster Tab

CONFIG: Loaded plugin edu.stanford.smi.protegex.pal_tabs - PAL Tabs

CONFIG: Loaded plugin edu.stanford.smi.protegex.ezpal - EZPal Tab

CONFIG: Loaded plugin edu.stanford.smi.protegex.facets_tab

CONFIG: Loaded plugin edu.stanford.smi.protegex.instance_tree

CONFIG: Loaded plugin edu.stanford.smi.protegex.prompt - PROMPT Tab

CONFIG: Loaded plugin edu.stanford.smi.protegex.umls_tab - UMLS Tab

CONFIG: Loaded plugin edu.stanford.smi.protegex.wordnet - WordNet Tab

CONFIG: Loaded plugin edu.stanford.smi.protegex.xml_tab - XML Tab

CONFIG: Loaded plugin org.algernon - Algernon

CONFIG: Loaded plugin se.liu.ida.JessTab - JessTab Plugin

CONFIG: Loaded plugin uk.ac.iam.soton.akt.tgviztab - TGVizTab

CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.debugger

CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.manchesterowlsyntaxeditor

CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.owldoc

CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.owlindividualstab

CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.owlviz

CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.protege.wizard - Basic Wizards

CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.protege.wizard.owl - OWL
Wizards

CONFIG: Preloading frame values

CONFIG: Preloading frame values

WARNING: Missing map instance: FSD_2_0_0_0_ProjectKB_Instance_140740 --
Property

MapUtil.getMap()

WARNING: null -- WidgetUtilities.isSuitableExport()

CONFIG: PROMPT: Loaded plugin ca.uvic.cs.cogz.PromptUIPlugin - CogZ

CONFIG: PROMPT: Loaded plugin
edu.stanford.smi.protegex.promptx.foam.FoamPlugin

- FOAM Plugin for Prompt

CONFIG: PROMPT: Loaded plugin
edu.stanford.smi.protegex.promptx.mappingDomainPSM

.MappingDomainPSM - Store mappings using the Domain_PSM ontology

CONFIG: PROMPT: Loaded plugin
edu.stanford.smi.protegex.promptx.simpleMappingSto

rage.SimpleMappingStorage - Store mapping using a simple mapping ontology

CONFIG: PROMPT: Loaded plugin
edu.stanford.smi.protegex.promptx.synonyms.Synonym

Plugin - Lexical matching with synonyms

CONFIG: PROMPT: Loaded plugin
edu.stanford.smi.protegex.promptx.umls.UMLSPlugin

- Using UMLS concept identifiers for matching

INFO: Prompt version 3.0

INFO: Prompt version date: August 8, 2006

INFO: UI display time = 1 sec

[ProtegeUI]  Warning: No ProjectView registered for project null

[ProtegeUI]  Warning: No ProjectView registered for project null

-----

WARNING: Wrong type: DefaultOWLNamedClass(personalia_oogarts,
FrameID(17:43362 1

)) -- DefaultKnowledgeBase.getFrameOfType()

SEVERE: Failed to save file
file:/C:/Documents%20and%20Settings/Henk-Jan/zoom1.o

wl -- java.lang.ClassCastException:
edu.stanford.smi.protege.model.DefaultCls

        at edu.stanford.smi.protegex.owl.writer.rdfxml.util.Util.getType
(Unknown

 Source)

        at
edu.stanford.smi.protegex.owl.writer.rdfxml.renderer.RDFAxiomRenderer

.renderIndividualAxioms(Unknown Source)

        at
edu.stanford.smi.protegex.owl.writer.rdfxml.renderer.RDFAxiomRenderer

.visitRDFIndividual(Unknown Source)

        at
edu.stanford.smi.protegex.owl.model.impl.DefaultRDFIndividual.accept(

Unknown Source)

        at
edu.stanford.smi.protegex.owl.writer.rdfxml.renderer.RDFAxiomRenderer

.write(Unknown Source)

        at
edu.stanford.smi.protegex.owl.writer.rdfxml.rdfwriter.OWLModelContent

Writer.writeContent(Unknown Source)

        at
edu.stanford.smi.protegex.owl.writer.rdfxml.rdfwriter.RDFXMLDocumentW

riter.writeDocument(Unknown Source)

        at
edu.stanford.smi.protegex.owl.writer.rdfxml.rdfwriter.OWLModelWriter.

write(Unknown Source)

        at
edu.stanford.smi.protegex.owl.writer.rdfxml.rdfwriter.OWLModelAllTrip

leStoresWriter.write(Unknown Source)

        at edu.stanford.smi.protegex.owl.jena.JenaOWLModel.save(Unknown
Source)

        at
edu.stanford.smi.protegex.owl.jena.export.JenaExportPlugin.exportProj

ect(Unknown Source)

        at
edu.stanford.smi.protegex.owl.jena.export.JenaExportPlugin.handleExpo

rtRequest(Unknown Source)

        at edu.stanford.smi.protege.ui.ProjectManager.exportProjectRequest
(Unkno

wn Source)

        at
edu.stanford.smi.protege.action.ExportPluginAction.actionPerformed(Un

known Source)

        at javax.swing.AbstractButton.fireActionPerformed(Unknown Source)

        at javax.swing.AbstractButton$Handler.actionPerformed(Unknown
Source)

        at javax.swing.DefaultButtonModel.fireActionPerformed(Unknown
Source)

        at javax.swing.DefaultButtonModel.setPressed(Unknown Source)

        at javax.swing.AbstractButton.doClick(Unknown Source)

        at javax.swing.plaf.basic.BasicMenuItemUI.doClick(Unknown Source)

        at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased
(Unknown

Source)

        at java.awt.Component.processMouseEvent(Unknown Source)

        at javax.swing.JComponent.processMouseEvent(Unknown Source)

        at java.awt.Component.processEvent(Unknown Source)

        at java.awt.Container.processEvent(Unknown Source)

        at java.awt.Component.dispatchEventImpl(Unknown Source)

        at java.awt.Container.dispatchEventImpl(Unknown Source)

        at java.awt.Component.dispatchEvent(Unknown Source)

        at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source)

        at java.awt.LightweightDispatcher.processMouseEvent(Unknown Source)

        at java.awt.LightweightDispatcher.dispatchEvent(Unknown Source)

        at java.awt.Container.dispatchEventImpl(Unknown Source)

        at java.awt.Window.dispatchEventImpl(Unknown Source)

        at java.awt.Component.dispatchEvent(Unknown Source)

        at java.awt.EventQueue.dispatchEvent(Unknown Source)

        at java.awt.EventDispatchThread.pumpOneEventForHierarchy(Unknown
Source)



        at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown
Source)

        at java.awt.EventDispatchThread.pumpEvents(Unknown Source)

        at java.awt.EventDispatchThread.pumpEvents(Unknown Source)

        at java.awt.EventDispatchThread.run(Unknown Source)



[ProtegeUI]  Warning: No ProjectView registered for project zoom1

Any help appreciated!



Bo
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