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[protege-discussion] Unable to convert Frames Project into "OWL/RDF Files"

Tania Tudorache tudorache at stanford.edu
Mon Jun 9 14:31:18 PDT 2008


Hi Tomas,

I forgot to send in my reply the link to the wiki page that explains 
briefly the Frames to OWL conversion:

http://protege.cim3.net/cgi-bin/wiki.pl?Frame2OWLExport

Cheers,
Tania

Tania Tudorache wrote:
> Hi Tomas,
>
> Thank you very much for the bug report. This is a regression from the 
> previous builds and we will fix this in the next beta build. The build 
> 500 contains some major reimplementation of the naming mechanism, and we 
> were expecting some problems in this release.
>
> If you don't want to wait until the next beta release for the fix, you 
> can use the Protege 3.4 beta 130, in which the conversion works fine. 
> The 130 build can be downloaded from here:
>
> http://protege.stanford.edu/download/old-releases/3.4-betas/build-130/full/
>
> Cheers,
> Tania
>
>
> Tomas Potok wrote:
>   
>> Hello all,
>>
>> steps I tried (Protege 3.4 beta):
>> - create new Project (.pont and .pins)
>> - create a new subclass under :THING named "testClass"
>> - save the project
>> - select "File / Convert Project to Format / OWL/RDF Files"
>> - the following exception resulted:
>>
>>
>> SEVERE: Failed to save file file:/E:/Documents%20and%20Settings/Administrator/My
>> %20Documents/test2.owl using Protege2Jena. -- com.hp.hpl.jena.shared.BadURIExcep
>> tion: Only well-formed absolute URIrefs can be included in RDF/XML output: <test
>> Class> Code: 58/REQUIRED_COMPONENT_MISSING in SCHEME: A component that is requir
>> ed by the scheme is missing.
>>         at com.hp.hpl.jena.xmloutput.impl.BaseXMLWriter.checkURI(BaseXMLWriter.j
>> ava:768)
>>         at com.hp.hpl.jena.xmloutput.impl.BaseXMLWriter.relativize(BaseXMLWriter
>> .java:745)
>>         at com.hp.hpl.jena.xmloutput.impl.Unparser.wURIreference(Unparser.java:8
>> 72)
>>         at com.hp.hpl.jena.xmloutput.impl.Unparser.wURIreference(Unparser.java:8
>> 76)
>>         at com.hp.hpl.jena.xmloutput.impl.Unparser.wAboutAttr(Unparser.java:867)
>>
>>         at com.hp.hpl.jena.xmloutput.impl.Unparser.wIdAboutAttrOpt(Unparser.java
>> :823)
>>         at com.hp.hpl.jena.xmloutput.impl.Unparser.wTypedNodeOrDescriptionCompac
>> t(Unparser.java:736)
>>         at com.hp.hpl.jena.xmloutput.impl.Unparser.wTypedNodeOrDescription(Unpar
>> ser.java:718)
>>         at com.hp.hpl.jena.xmloutput.impl.Unparser.wTypedNode(Unparser.java:691)
>>
>>         at com.hp.hpl.jena.xmloutput.impl.Unparser.wObj(Unparser.java:635)
>>         at com.hp.hpl.jena.xmloutput.impl.Unparser.wObjStar(Unparser.java:312)
>>         at com.hp.hpl.jena.xmloutput.impl.Unparser.wRDF(Unparser.java:293)
>>         at com.hp.hpl.jena.xmloutput.impl.Unparser.write(Unparser.java:195)
>>         at com.hp.hpl.jena.xmloutput.impl.Abbreviated.writeBody(Abbreviated.java
>> :138)
>>         at com.hp.hpl.jena.xmloutput.impl.BaseXMLWriter.writeXMLBody(BaseXMLWrit
>> er.java:452)
>>         at com.hp.hpl.jena.xmloutput.impl.BaseXMLWriter.write(BaseXMLWriter.java
>> :424)
>>         at com.hp.hpl.jena.xmloutput.impl.Abbreviated.write(Abbreviated.java:124
>> )
>>         at edu.stanford.smi.protegex.owl.jena.JenaOWLModel.saveModel(Unknown Sou
>> rce)
>>         at edu.stanford.smi.protegex.owl.jena.JenaOWLModel.save(Unknown Source)
>>         at edu.stanford.smi.protegex.owl.jena.JenaOWLModel.save(Unknown Source)
>>         at edu.stanford.smi.protegex.owl.jena.protege2jena.Protege2Jena.saveAll(
>> Unknown Source)
>>         at edu.stanford.smi.protegex.owl.jena.JenaOWLModel.save(Unknown Source)
>>         at edu.stanford.smi.protegex.owl.jena.JenaKnowledgeBaseFactory.saveKnowl
>> edgeBase(Unknown Source)
>>         at edu.stanford.smi.protege.model.Project.saveDomainKB(Unknown Source)
>>         at edu.stanford.smi.protege.model.Project.save(Unknown Source)
>>         at edu.stanford.smi.protege.ui.ProjectManager.save(Unknown Source)
>>         at edu.stanford.smi.protege.ui.ProjectManager.changeProjectStorageFormat
>> Request(Unknown Source)
>>         at edu.stanford.smi.protege.action.ChangeProjectStorageFormat.actionPerf
>> ormed(Unknown Source)
>>         at javax.swing.AbstractButton.fireActionPerformed(Unknown Source)
>>         at javax.swing.AbstractButton$Handler.actionPerformed(Unknown Source)
>>         at javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source)
>>         at javax.swing.DefaultButtonModel.setPressed(Unknown Source)
>>         at javax.swing.AbstractButton.doClick(Unknown Source)
>>         at javax.swing.plaf.basic.BasicMenuItemUI.doClick(Unknown Source)
>>         at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(Unknown
>> Source)
>>         at java.awt.Component.processMouseEvent(Unknown Source)
>>         at javax.swing.JComponent.processMouseEvent(Unknown Source)
>>         at java.awt.Component.processEvent(Unknown Source)
>>         at java.awt.Container.processEvent(Unknown Source)
>>         at java.awt.Component.dispatchEventImpl(Unknown Source)
>>         at java.awt.Container.dispatchEventImpl(Unknown Source)
>>         at java.awt.Component.dispatchEvent(Unknown Source)
>>         at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source)
>>         at java.awt.LightweightDispatcher.processMouseEvent(Unknown Source)
>>         at java.awt.LightweightDispatcher.dispatchEvent(Unknown Source)
>>         at java.awt.Container.dispatchEventImpl(Unknown Source)
>>         at java.awt.Window.dispatchEventImpl(Unknown Source)
>>         at java.awt.Component.dispatchEvent(Unknown Source)
>>         at java.awt.EventQueue.dispatchEvent(Unknown Source)
>>         at java.awt.EventDispatchThread.pumpOneEventForHierarchy(Unknown Source)
>>
>>         at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
>>         at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
>>         at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
>>         at java.awt.EventDispatchThread.run(Unknown Source)
>>
>>
>> Am I doing something conceptually wrong?
>>
>> My intention was to convert my existing small Frames ontology to explore OWL
>> capabilities. I found nothing usable on this problem on the internet...
>>
>> Thanks
>>
>> Tomas
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>>     
>
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