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[protege-discussion] support for OntoBase

protege at ontospace.net protege at ontospace.net
Wed Mar 26 13:31:05 PDT 2008


Hello Paul, 

Thank you for reporting this problem. I have fixed it and uploaded a new build of Ontobase 3.3.2 (you can get it in the same location as before)

As for documentation - we are working on it, but for now I have updated instructions at http://protegewiki.stanford.edu/index.php/OntoBase

Please don't hesitate to ask any question here or forward it directly to support at ontospace.net

--Len



>Hello All
>
>OntoBase seems installed correctly so is the JDBC driver,  Protege connects to 
>the database, the problem is that only one empty table is imported, without 
>fields and items. My database is composed of two tables and a foreign key 
>relationship. 
>I need to import the entire database.. I guess (there is not any tutorial 
>along with OntoBase). I need a full tutorial example on OntoBase, where can I 
>find one? Here is the printout in the command window, what does it mean??:
>
>com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException: 
>Table 'istat.user_constraints' doesn't exist
>        at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native 
>Method)
>        at sun.reflect.NativeConstructorAccessorImpl.newInstance(Unknown 
>Source)
>        at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(Unknown 
>Source)
>        at java.lang.reflect.Constructor.newInstance(Unknown Source)
>        at com.mysql.jdbc.Util.handleNewInstance(Util.java:406)
>        at com.mysql.jdbc.Util.getInstance(Util.java:381)
>        at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:1030)
>        at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:956)
>        at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3491)
>        at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3423)
>        at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:1936)
>        at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2060)
>        at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2536)
>        at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2465)
>        at com.mysql.jdbc.StatementImpl.executeQuery(StatementImpl.java:1383)
>        at Graph.FindDep.getPrimaryKeys(FindDep.java:174)
>        at Graph.FindDep.intFull(FindDep.java:142)
>        at Graph.Graph.iniThread(Graph.java:497)
>        at com.ngs.Navigator.import_model(Navigator.java:858)
>        at com.ngs.Navigator.import_model(Navigator.java:835)
>        at Graph.GraphPanel.run(GraphPanel.java:248)
>        at java.lang.Thread.run(Unknown Source)
>java.lang.NullPointerException
>        at Graph.FindDep.getPrimaryKeys(FindDep.java:211)
>        at Graph.FindDep.intFull(FindDep.java:142)
>        at Graph.Graph.iniThread(Graph.java:497)
>        at com.ngs.Navigator.import_model(Navigator.java:858)
>        at com.ngs.Navigator.import_model(Navigator.java:835)
>        at Graph.GraphPanel.run(GraphPanel.java:248)
>        at java.lang.Thread.run(Unknown Source)
>
>thanks
>
>
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