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[protege-discussion] Trying to Start Protege 3.3.1 server on Linux

Samuel Lee samlee at ncmir.ucsd.edu
Fri Jul 17 11:03:31 PDT 2009


When trying to start the Protege Server 3.3.1, I'm getting the  
following errors:

Any ideas?

Sam


[root at protege33 Protege_3.3.1]# ./run_protege_server.sh
java.rmi.server.ExportException: Port already in use: 1099; nested  
exception is:
	java.net.BindException: Address already in use
	at sun.rmi.transport.tcp.TCPTransport.listen(TCPTransport.java:310)
	at sun.rmi.transport.tcp.TCPTransport.exportObject(TCPTransport.java: 
218)
	at sun.rmi.transport.tcp.TCPEndpoint.exportObject(TCPEndpoint.java:393)
	at sun.rmi.transport.LiveRef.exportObject(LiveRef.java:129)
	at sun.rmi.server.UnicastServerRef.exportObject(UnicastServerRef.java: 
190)
	at sun.rmi.registry.RegistryImpl.setup(RegistryImpl.java:92)
	at sun.rmi.registry.RegistryImpl.<init>(RegistryImpl.java:78)
	at sun.rmi.registry.RegistryImpl.main(RegistryImpl.java:322)
Caused by: java.net.BindException: Address already in use
	at java.net.PlainSocketImpl.socketBind(Native Method)
	at java.net.PlainSocketImpl.bind(PlainSocketImpl.java:359)
	at java.net.ServerSocket.bind(ServerSocket.java:319)
	at java.net.ServerSocket.<init>(ServerSocket.java:185)
	at java.net.ServerSocket.<init>(ServerSocket.java:97)
	at  
sun 
.rmi 
.transport 
.proxy 
.RMIDirectSocketFactory.createServerSocket(RMIDirectSocketFactory.java: 
27)
	at  
sun 
.rmi 
.transport 
.proxy 
.RMIMasterSocketFactory.createServerSocket(RMIMasterSocketFactory.java: 
333)
	at sun.rmi.transport.tcp.TCPEndpoint.newServerSocket(TCPEndpoint.java: 
649)
	at sun.rmi.transport.tcp.TCPTransport.listen(TCPTransport.java:299)
	... 7 more
CONFIG: Protege 3.3.1 Build 430, JVM 1.6.0_13-b03, memory=208M, Linux,  
encoding=UTF-8, language=en, country=US
CONFIG: Loaded plugin org.algernon - Algernon
CONFIG: Loaded plugin edu.stanford.smi.protegex.owl - OWL Plugin
CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.owlindividualstab
CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.owldoc
CONFIG: Loaded plugin edu.stanford.smi.protegex.rdf_backend - RDF  
Backend
CONFIG: Loaded plugin edu.stanford.smi.protegex.wordnet - WordNet Tab
CONFIG: Loaded plugin edu.stanford.smi.protegex.datamaster -  
DataMaster Tab
CONFIG: Loaded plugin edu.stanford.smi.protegex.facets_tab
CONFIG: Loaded plugin edu.stanford.smi.protegex.changes - Changes tab
CONFIG: Loaded plugin ca.uvic.cs.chisel.jambalaya - Jambalaya
CONFIG: Loaded plugin edu.stanford.smi.protegex.instance_tree
CONFIG: Loaded plugin edu.stanford.smi.protegex.pal_tabs - PAL Tabs
CONFIG: Loaded plugin edu.stanford.smi.protegex.ezpal - EZPal Tab
CONFIG: Loaded plugin edu.stanford.smi.protegex.standard_extensions -  
Graph Widget, Table Widget
CONFIG: Loaded plugin edu.stanford.smi.protegex.chatPlugin
CONFIG: Loaded plugin edu.stanford.smi.protege.collab - Collaborative  
Protege
CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.protege.wizard - Basic  
Wizards
CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.protege.wizard.owl - OWL  
Wizards
CONFIG: Loaded plugin edu.stanford.smi.protegex.xml_tab - XML Tab
CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.debugger
CONFIG: Loaded plugin edu.stanford.smi.protegex.prompt - PROMPT Tab
CONFIG: Loaded plugin edu.stanford.smi.protege.stringsearch - String  
Search Tab
CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.owlviz
CONFIG: Loaded plugin edu.stanford.smi.protegex.umls_tab - UMLS Tab
CONFIG: Loaded plugin edu.stanford.smi.protege.script - Script Plugin
CONFIG: Loaded plugin dfki.protege.ontoviz
CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.manchesterowlsyntaxeditor
CONFIG: Loaded plugin uk.ac.iam.soton.akt.tgviztab - TGVizTab
CONFIG: Loaded plugin se.liu.ida.JessTab - JessTab Plugin
SEVERE: java.rmi.ConnectException: Connection refused to host:  
198.202.95.113; nested exception is:
	java.net.ConnectException: Connection refused
	at sun.rmi.transport.tcp.TCPEndpoint.newSocket(TCPEndpoint.java:601)
	at sun.rmi.transport.tcp.TCPChannel.createConnection(TCPChannel.java: 
198)
	at sun.rmi.transport.tcp.TCPChannel.newConnection(TCPChannel.java:184)
	at sun.rmi.server.UnicastRef.newCall(UnicastRef.java:322)
	at sun.rmi.registry.RegistryImpl_Stub.rebind(Unknown Source)
	at edu.stanford.smi.protege.server.Server.bindName(Unknown Source)
	at edu.stanford.smi.protege.server.Server.initialize(Unknown Source)
	at edu.stanford.smi.protege.server.Server.<init>(Unknown Source)
	at edu.stanford.smi.protege.server.Server.startServer(Unknown Source)
	at edu.stanford.smi.protege.server.Server.startServer(Unknown Source)
	at edu.stanford.smi.protege.server.Server.main(Unknown Source)
Caused by: java.net.ConnectException: Connection refused
	at java.net.PlainSocketImpl.socketConnect(Native Method)
	at java.net.PlainSocketImpl.doConnect(PlainSocketImpl.java:333)
	at java.net.PlainSocketImpl.connectToAddress(PlainSocketImpl.java:195)
	at java.net.PlainSocketImpl.connect(PlainSocketImpl.java:182)
	at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:366)
	at java.net.Socket.connect(Socket.java:519)
	at java.net.Socket.connect(Socket.java:469)
	at java.net.Socket.<init>(Socket.java:366)
	at java.net.Socket.<init>(Socket.java:180)
	at  
edu 
.stanford 
.smi.protege.server.ServerRmiSocketFactory.createSocket(Unknown Source)
	at sun.rmi.transport.tcp.TCPEndpoint.newSocket(TCPEndpoint.java:595)
	... 10 more
  -- Server.bindName()
SEVERE: server startup failed -- java.rmi.ConnectException: Connection  
refused to host: 198.202.95.113; nested exception is:
	java.net.ConnectException: Connection refused
	at sun.rmi.transport.tcp.TCPEndpoint.newSocket(TCPEndpoint.java:601)
	at sun.rmi.transport.tcp.TCPChannel.createConnection(TCPChannel.java: 
198)
	at sun.rmi.transport.tcp.TCPChannel.newConnection(TCPChannel.java:184)
	at sun.rmi.server.UnicastRef.newCall(UnicastRef.java:322)
	at sun.rmi.registry.RegistryImpl_Stub.rebind(Unknown Source)
	at edu.stanford.smi.protege.server.Server.bindName(Unknown Source)
	at edu.stanford.smi.protege.server.Server.initialize(Unknown Source)
	at edu.stanford.smi.protege.server.Server.<init>(Unknown Source)
	at edu.stanford.smi.protege.server.Server.startServer(Unknown Source)
	at edu.stanford.smi.protege.server.Server.startServer(Unknown Source)
	at edu.stanford.smi.protege.server.Server.main(Unknown Source)
Caused by: java.net.ConnectException: Connection refused
	at java.net.PlainSocketImpl.socketConnect(Native Method)
	at java.net.PlainSocketImpl.doConnect(PlainSocketImpl.java:333)
	at java.net.PlainSocketImpl.connectToAddress(PlainSocketImpl.java:195)
	at java.net.PlainSocketImpl.connect(PlainSocketImpl.java:182)
	at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:366)
	at java.net.Socket.connect(Socket.java:519)
	at java.net.Socket.connect(Socket.java:469)
	at java.net.Socket.<init>(Socket.java:366)
	at java.net.Socket.<init>(Socket.java:180)
	at  
edu 
.stanford 
.smi.protege.server.ServerRmiSocketFactory.createSocket(Unknown Source)
	at sun.rmi.transport.tcp.TCPEndpoint.newSocket(TCPEndpoint.java:595)
	... 10 more






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