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[protege-discussion] WebProtege ontology loading failure

Manolis Platakis platakis at di.uoa.gr
Mon May 11 05:00:42 PDT 2009


> 4. Try to connect with a Protege client to the server, using the
> user/pass: webprotege/webprotege and try to open project Pizza. Did you
> succeed?
>

I succeeded.

> 5. If you succeeded with all previous steps, but still has problems,
> please send me the metaproject files and the a zip file with
> catalina.out from the tomcat/logs folder.
>

Should I e-mail you the log?

Thank you very much!

Manolis

>
> Manolis Platakis wrote:
>> Hello,
>>
>> I have a problem concerning WebProtege. I am executing WebProtege from
>> the Eclipse IDE (in both hosted and web mode) and everything works
>> perfectly fine until I try to load an ontology where I get the error
>> "Load project Pizza failed. Message: The call failed on the server;
>> see server log for details". You can see the errors in the end of my
>> e-mail. I have tried both absolute and relative (to Protege server)
>> paths for the ontologies in the metaproject with no luck. I have also
>> made sure that the metaproject files are identical in both places.
>>
>> I would really be grateful if you could help me out. Thanks you very
>> much for your help and effort.
>>
>> Best regards,
>> Manolis Platakis
>>
>> [WARN] StandardContext[]Exception while dispatching incoming RPC call
>> com.google.gwt.user.server.rpc.UnexpectedException: Service method
>> 'public abstract java.lang.Integer
>> edu.stanford.bmir.protege.web.client.rpc.OntologyService.loadProject(java.lang.String)'
>> threw an unexpected exception: java.lang.RuntimeException: Cannot open
>> project Pizza
>>       at com.google.gwt.user.server.rpc.RPC.encodeResponseForFailure(RPC.java:360)
>>       at com.google.gwt.user.server.rpc.RPC.invokeAndEncodeResponse(RPC.java:546)
>>       at com.google.gwt.user.server.rpc.RemoteServiceServlet.processCall(RemoteServiceServlet.java:164)
>>       at com.google.gwt.user.server.rpc.RemoteServiceServlet.doPost(RemoteServiceServlet.java:86)
>>       at javax.servlet.http.HttpServlet.service(HttpServlet.java:709)
>>       at javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
>>       at com.google.gwt.dev.shell.GWTShellServlet.service(GWTShellServlet.java:289)
>>       at javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
>>       at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:237)
>>       at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:157)
>>       at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:214)
>>       at org.apache.catalina.core.StandardValveContext.invokeNext(StandardValveContext.java:104)
>>       at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:520)
>>       at org.apache.catalina.core.StandardContextValve.invokeInternal(StandardContextValve.java:198)
>>       at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:152)
>>       at org.apache.catalina.core.StandardValveContext.invokeNext(StandardValveContext.java:104)
>>       at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:520)
>>       at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:137)
>>       at org.apache.catalina.core.StandardValveContext.invokeNext(StandardValveContext.java:104)
>>       at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:118)
>>       at org.apache.catalina.core.StandardValveContext.invokeNext(StandardValveContext.java:102)
>>       at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:520)
>>       at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109)
>>       at org.apache.catalina.core.StandardValveContext.invokeNext(StandardValveContext.java:104)
>>       at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:520)
>>       at org.apache.catalina.core.ContainerBase.invoke(ContainerBase.java:929)
>>       at org.apache.coyote.tomcat5.CoyoteAdapter.service(CoyoteAdapter.java:160)
>>       at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:799)
>>       at org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.processConnection(Http11Protocol.java:705)
>>       at org.apache.tomcat.util.net.TcpWorkerThread.runIt(PoolTcpEndpoint.java:577)
>>       at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:683)
>>       at java.lang.Thread.run(Unknown Source)
>> Caused by: java.lang.RuntimeException: Cannot open project Pizza
>>       at edu.stanford.bmir.protege.web.server.ProjectManager.ensureProjectOpen(ProjectManager.java:110)
>>       at edu.stanford.bmir.protege.web.server.ProjectManager.getServerProject(ProjectManager.java:101)
>>       at edu.stanford.bmir.protege.web.server.OntologyServiceImpl.loadProject(OntologyServiceImpl.java:106)
>>       at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>       at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
>>       at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
>>       at java.lang.reflect.Method.invoke(Unknown Source)
>>       at com.google.gwt.user.server.rpc.RPC.invokeAndEncodeResponse(RPC.java:527)
>>       at com.google.gwt.user.server.rpc.RemoteServiceServlet.processCall(RemoteServiceServlet.java:164)
>>       at com.google.gwt.user.server.rpc.RemoteServiceServlet.doPost(RemoteServiceServlet.java:86)
>>       at javax.servlet.http.HttpServlet.service(HttpServlet.java:709)
>>       at javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
>>       at com.google.gwt.dev.shell.GWTShellServlet.service(GWTShellServlet.java:289)
>>       at javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
>>       at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:237)
>>       at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:157)
>>       at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:214)
>>       at org.apache.catalina.core.StandardValveContext.invokeNext(StandardValveContext.java:104)
>>       at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:520)
>>       at org.apache.catalina.core.StandardContextValve.invokeInternal(StandardContextValve.java:198)
>>       at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:152)
>>       at org.apache.catalina.core.StandardValveContext.invokeNext(StandardValveContext.java:104)
>>       at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:520)
>>       at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:137)
>>       at org.apache.catalina.core.StandardValveContext.invokeNext(StandardValveContext.java:104)
>>       at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:118)
>>       at org.apache.catalina.core.StandardValveContext.invokeNext(StandardValveContext.java:102)
>>       at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:520)
>>       at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109)
>>       at org.apache.catalina.core.StandardValveContext.invokeNext(StandardValveContext.java:104)
>>       at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:520)
>>       at org.apache.catalina.core.ContainerBase.invoke(ContainerBase.java:929)
>>       at org.apache.coyote.tomcat5.CoyoteAdapter.service(CoyoteAdapter.java:160)
>>       at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:799)
>>       at org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.processConnection(Http11Protocol.java:705)
>>       at org.apache.tomcat.util.net.TcpWorkerThread.runIt(PoolTcpEndpoint.java:577)
>>       at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:683)
>>       at java.lang.Thread.run(Unknown Source)
>>
>> [ERROR] There were errors at loading project Pizza
>> com.google.gwt.user.client.rpc.StatusCodeException: The call failed on
>> the server; see server log for details
>>       at com.google.gwt.user.client.rpc.impl.RequestCallbackAdapter.onResponseReceived(RequestCallbackAdapter.java:192)
>>       at com.google.gwt.http.client.Request.fireOnResponseReceivedImpl(Request.java:254)
>>       at com.google.gwt.http.client.Request.fireOnResponseReceivedAndCatch(Request.java:226)
>>       at com.google.gwt.http.client.Request.fireOnResponseReceived(Request.java:217)
>>       at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>       at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
>>       at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
>>       at java.lang.reflect.Method.invoke(Unknown Source)
>>       at com.google.gwt.dev.shell.MethodAdaptor.invoke(MethodAdaptor.java:103)
>>       at com.google.gwt.dev.shell.ie.IDispatchImpl.callMethod(IDispatchImpl.java:126)
>>       at com.google.gwt.dev.shell.ie.IDispatchProxy.invoke(IDispatchProxy.java:155)
>>       at com.google.gwt.dev.shell.ie.IDispatchImpl.Invoke(IDispatchImpl.java:294)
>>       at com.google.gwt.dev.shell.ie.IDispatchImpl.method6(IDispatchImpl.java:194)
>>       at org.eclipse.swt.internal.ole.win32.COMObject.callback6(COMObject.java:117)
>>       at org.eclipse.swt.internal.win32.OS.DispatchMessageW(Native Method)
>>       at org.eclipse.swt.internal.win32.OS.DispatchMessage(OS.java:1925)
>>       at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:2966)
>>       at com.google.gwt.dev.GWTShell.pumpEventLoop(GWTShell.java:720)
>>       at com.google.gwt.dev.GWTShell.run(GWTShell.java:593)
>>       at com.google.gwt.dev.GWTShell.main(GWTShell.java:357)
>>
>>
>
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-- 
Manolis Platakis, Postgraduate Student & Research Associate
Department of Informatics and Telecommunications
National and Kapodistrian University of Athens
http://cgi.di.uoa.gr/~platakis/



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