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[protege-discussion] need help for opening error in Protege 3.4.x

Timothy Redmond tredmond at
Wed Dec 14 21:23:11 PST 2011

The resource

is declared as an annotation property (in obsolete.owl) and as a class 
(in obi.owl).  Protege 4 can handle this type of pun but Protege 3 cannot.


On 12/14/2011 12:52 PM, Jie Zheng wrote:
> Hi,
> I assigned IDs to the ontology terms by lisp scripts (using Jena). 
> After that, the owl file has problem to be opened in protege 3.4.x 
> (Error with Metadata, OWL Classes and Properties tabs, see the 
> attached image). However, everything works fine with Protege 4.1. I 
> attached the error message and the ontology owl file.
> The script has been used for long time. Never has this issue before. I 
> have no clue it is a protege bug, or something wrong with the OWL file.
> Any help would be highly appreciated.
> Thanks,
> Jie
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