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[protege-owl] OWL-S Tab problem

durrai durrai_1980 at yahoo.co.uk
Wed Aug 13 09:39:03 PDT 2008



I have the same problem.
Could you solve this problem Surya? If yes, pl let me know how to activate
owl-s properly.
Thanks



Surya Bahadur Kathayat wrote:
> 
> Hi,
> 
> With Poetege 3.3.1, I am trying to use OWL-S Editor. After installing the
> OWL-S plugin, when I go to the project option and then configure and then
> check the owlstab...than new tap appears but with red dot in the center.
> There is nothing in the tab. When I checked the log file, it shows as
> below message. Somebody have idea about it ???
> 
> 
> 2008.01.11 11:12:51.343 CET WARNING: java.lang.ClassCastException:
> edu.stanford.smi.protege.model.DefaultKnowledgeBase
>     at com.sri.owlseditor.Owlstab.initialize(Owlstab.java:118)
>     at
> edu.stanford.smi.protege.widget.WidgetUtilities.createTabWidget(Unknown
> Source)
>     at edu.stanford.smi.protege.ui.ProjectView.addTab(Unknown Source)
>     at edu.stanford.smi.protege.ui.ProjectView.addEnabledTabs(Unknown
> Source)
>     at
> edu.stanford.smi.protege.ui.ProjectView.synchronizeTabbedPane(Unknown
> Source)
>     at edu.stanford.smi.protege.ui.ProjectView.reloadPartial(Unknown
> Source)
>     at edu.stanford.smi.protege.ui.ProjectView.reload(Unknown Source)
>     at edu.stanford.smi.protege.ui.ProjectManager.reloadUI(Unknown Source)
>     at
> edu.stanford.smi.protege.ui.ProjectManager.configureProjectRequest(Unknown
> Source)
>     at
> edu.stanford.smi.protege.action.ConfigureProject.actionPerformed(Unknown
> Source)
>     at javax.swing.AbstractButton.fireActionPerformed(Unknown Source)
>     at javax.swing.AbstractButton$Handler.actionPerformed(Unknown Source)
>     at javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source)
>     at javax.swing.DefaultButtonModel.setPressed(Unknown Source)
>     at javax.swing.AbstractButton.doClick(Unknown Source)
>     at javax.swing.plaf.basic.BasicMenuItemUI.doClick(Unknown Source)
>     at
> javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(Unknown
> Source)
>     at java.awt.Component.processMouseEvent(Unknown Source)
>     at javax.swing.JComponent.processMouseEvent(Unknown Source)
>     at java.awt.Component.processEvent(Unknown Source)
>     at java.awt.Container.processEvent(Unknown Source)
>     at java.awt.Component.dispatchEventImpl(Unknown Source)
>     at java.awt.Container.dispatchEventImpl(Unknown Source)
>     at java.awt.Component.dispatchEvent(Unknown Source)
>     at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source)
>     at java.awt.LightweightDispatcher.processMouseEvent(Unknown Source)
>     at java.awt.LightweightDispatcher.dispatchEvent(Unknown Source)
>     at java.awt.Container.dispatchEventImpl(Unknown Source)
>     at java.awt.Window.dispatchEventImpl(Unknown Source)
>     at java.awt.Component.dispatchEvent(Unknown Source)
>     at java.awt.EventQueue.dispatchEvent(Unknown Source)
>     at java.awt.EventDispatchThread.pumpOneEventForHierarchy(Unknown
> Source)
>     at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
>     at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
>     at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
>     at java.awt.EventDispatchThread.run(Unknown Source)
> 
>  
> 
> 
> ---
> Surya Bahadur Kathayat
>  
> Research Fellow/PhD Candidate
> Norwegian University of Science and Technology (NTNU)
> Department of Telematics(ITEM)
> 
>  
> 
> Office Room No. 160.
> 
> NTNU, Computer and Information Science Department (IDI)
> 
> Trondheim , Norway
> 
> 
> Office Tel. +47 73550438
> 
> Mobile No. +47 46392873
> 
> E-mail: surya at item.ntnu.no
> Blog: www.kathayat.wordpress.com
> 
> 
> 
> 
> 
>> From: protege-owl-request at lists.stanford.edu
>> Subject: protege-owl Digest, Vol 17, Issue 121
>> To: protege-owl at lists.stanford.edu
>> Date: Fri, 28 Dec 2007 18:32:56 -0800
>> 
>> Send protege-owl mailing list submissions to
>> 	protege-owl at lists.stanford.edu
>> 
>> To subscribe or unsubscribe via the World Wide Web, visit
>> 	https://mailman.stanford.edu/mailman/listinfo/protege-owl
>> or, via email, send a message with subject or body 'help' to
>> 	protege-owl-request at lists.stanford.edu
>> 
>> You can reach the person managing the list at
>> 	protege-owl-owner at lists.stanford.edu
>> 
>> When replying, please edit your Subject line so it is more specific
>> than "Re: Contents of protege-owl digest..."
>> 
>> 
>> Today's Topics:
>> 
>>    1. Re: disabling log and OutOfMemoryError: SWRL	rules	processing
>>       (Thusitha Mabotuwana)
>>    2. Re: Exception on SWRL Query (correction) (Martin O'Connor)
>>    3. SWRL owl files not found (Ely Edison Matos)
>> 
>> 
>> ----------------------------------------------------------------------
>> 
>> Message: 1
>> Date: Sat, 29 Dec 2007 10:08:09 +1300
>> From: Thusitha Mabotuwana <thusitha at cs.auckland.ac.nz>
>> Subject: Re: [protege-owl] disabling log and OutOfMemoryError: SWRL
>> 	rules	processing
>> To: protege-owl at lists.stanford.edu
>> Message-ID:
>> 	<20071229100809.9kdmaep4goggkkos at webmail.cs.auckland.ac.nz>
>> Content-Type: text/plain;	charset=ISO-8859-1;	format="flowed"
>> 
>> There's probably a better answer, but anyway, here's something you can
>> do:
>> 
>> 1. Have a mylogging.properties in your project and set:
>> -Djava.util.logging.config.file=path/mylogging.properties when running 
>> Java. If
>> you're using eclipse, you can do this using the run dialog where you can
>> do
>> something like:
>> -Djava.util.logging.config.file=${workspace_loc:\path\mylogging.properties}
>> so
>> that it's always relative to your project path. Of course you can use
>> fixed
>> path too, but I prefer using relative path cos I tend to work on 2
>> machines.
>> 
>> What you can do is find the default logging.properties in C:\Program
>> Files\Java\jre1.6.0_03\lib (or wherever you've got Java installed) and
>> copy
>> this to your project folder and then rename it. Then find the line that
>> says:
>> java.util.logging.ConsoleHandler.level = INFO and change it to:
>> java.util.logging.ConsoleHandler.level = OFF.
>> 
>> This should turn off all logging msgs. If you want localized logging, for
>> your
>> own debugging purposes, you should be able to set this on/off on a class
>> basis
>> as well..A bit of googling should explain how to do this.
>> 
>> 2. From the trace you've pasted, CONFIG: Protege 3.4 Build 122, JVM
>> 1.6.0_02-b06, memory=66M, it seems like you're using the default 66M 
>> heap size.
>> http://www.nabble.com/Max-size-of-an-ontology-tt14141872.html#a14164016
>> is a
>> link that tells you how to increase this. Seems like you're using
>> eclipse, and
>> in this case it's just a matter of doing:
>> -Xmx256M in the Run Dialog and passing the JVM arguments.
>> 
>> 
>> 
>> 
>> 
>> Quoting zhang weishan <dr_zhangws at yahoo.com>:
>> 
>> >
>> >
>> >
>> > Dear all,
>> >    I want to measure the performance of an owl/swrl application, i 
>> > have two questions:
>> >    1. how to disable the showing the followed info, which should slow 
>> > down the performance.
>> >    2. I have one class that load some SWRL and start processing, is 
>> > it good to
>> >  instantiate another class which is used to  process other SWRL 
>> > rules? I got the out of memory error.
>> >
>> >    Best regards,
>> >    Weishan
>> >
>> > ( Why always went to spam, resent)
>> >
>> > CONFIG: Protege 3.4 Build 122, JVM 1.6.0_02-b06, memory=66M, Windows 
>> > Vista, encoding=UTF-8, language=en, country=US
>> > CONFIG: Loaded plugin edu.stanford.smi.protegex.owl - OWL Plugin
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.conditions.ConditionsWidget --
>> >  PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.ResourceListWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.properties.domain.OWLDomainWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.database.OWLDatabaseKnowledgeBaseFactory
>> -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> >
>> edu.stanford.smi.protegex.owl.ui.cls.ClassAnnotationsAndDescriptionWidget
>> -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> >
>> edu.stanford.smi.protegex.owl.storage.ProtegeFromOWLFilesCreateProjectPlugin 
>> > -- PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.metadatatab.OWLMetadataTab -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.MultiResourceWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate
>> >  plugin: 
>> > edu.stanford.smi.protegex.owl.ui.metadatatab.OntologyURIWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.OWLDateTimeWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.metadatatab.OWLNamespacesWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.MultiLiteralWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.swrl.ui.SWRLProjectPlugin -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.SingleLiteralWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.jena.export.JenaTurtleFileExportPlugin 
>> > -- PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.properties.OWLPropertiesTab --
>> >  PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.cls.OWLClassesTab -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.jena.JenaKnowledgeBaseFactory -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.jena.importer.JenaImportPlugin -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.properties.range.OWLRangeWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.conditions.AssertedConditionsWidget 
>> > -- PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.jena.export.JenaExportPlugin -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.conditions.InferredConditionsWidget 
>> > -- PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin:
>> >  
>> >
>> edu.stanford.smi.protegex.owl.ui.properties.types.OWLDatatypePropertyTypesWidget
>> -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> >
>> edu.stanford.smi.protegex.owl.ui.properties.types.RDFPropertyTypesWidget
>> -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.clsdesc.DisjointClassesWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.jena.export.JenaN3FileExportPlugin -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.SingleResourceWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.jena.export.JenaNTripleFileExportPlugin 
>> > -- PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.metadata.AnnotationsWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.OWLTimeWidget
>> >  -- PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.properties.OWLInversePropertyWidget 
>> > -- PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.database.CreateOWLDatabaseProjectPlugin 
>> > -- PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.cls.ClassTypeConverterWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.ClassFormWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.metadata.OWLMetadataWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.swrl.ui.tab.SWRLTab -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.RDFSSubClassOfWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin:
>> >  edu.stanford.smi.protegex.owl.ui.widget.RDFListWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.metadata.RDFSNamedClassMetadataWidget
>> -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.individuals.OWLIndividualsTab -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.OWLDateWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.cls.SwitchableClassDefinitionWidget 
>> > -- PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.DataRangeFieldWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.RDFPropertiesWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> >
>> edu.stanford.smi.protegex.owl.ui.properties.types.OWLObjectPropertyTypesWidget 
>> > --
>> >  PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.OWLFormsTab -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.swrl.ui.widget.SWRLRuleSlotWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> >
>> edu.stanford.smi.protegex.owl.database.CreateOWLDatabaseFromFileProjectPlugin
>> -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.InferredSuperClassesWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.SingleLiteralAreaWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.menu.OWLMenuProjectPlugin -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> >
>> edu.stanford.smi.protegex.owl.ui.clsproperties.PropertyRestrictionsTreeWidget
>> -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin:
>> >  edu.stanford.smi.protegex.owl.ui.widget.HeaderWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.jena.OWLFilesCreateProjectPlugin -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.OWLFormWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> >
>> edu.stanford.smi.protegex.owl.ui.metadatatab.alldifferent.AllDifferentWidget 
>> > -- PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.metadata.NameDocumentationWidget -- 
>> > PluginUtilities.checkPlugin()
>> > WARNING: Duplicate plugin: 
>> > edu.stanford.smi.protegex.owl.ui.widget.ExternalResourceURLWidget -- 
>> > PluginUtilities.checkPlugin()
>> > CONFIG: Loaded plugin ca.uvic.cs.chisel.jambalaya - Jambalaya
>> > CONFIG: Loaded plugin dfki.protege.ontoviz
>> > CONFIG: Loaded plugin edu.stanford.smi.protegex.rdf_backend
>> >  - RDF
>> >  Backend
>> > CONFIG: Loaded plugin
>> >  edu.stanford.smi.protegex.changes - Changes tab
>> > CONFIG: Loaded plugin edu.stanford.smi.protegex.chatPlugin
>> > CONFIG: Loaded plugin edu.stanford.smi.protege.collab - Collaborative
>> Protege
>> > CONFIG: Loaded plugin edu.stanford.smi.protege.script - Script Plugin
>> > CONFIG: Loaded plugin edu.stanford.smi.protegex.standard_extensions - 
>> > Graph Widget, Table Widget
>> > CONFIG: Loaded plugin edu.stanford.smi.protege.stringsearch - String 
>> > Search Tab
>> > CONFIG: Loaded plugin edu.stanford.smi.protegex.datamaster - DataMaster
>> Tab
>> > CONFIG: Loaded plugin edu.stanford.smi.protegex.pal_tabs - PAL Tabs
>> > CONFIG: Loaded plugin edu.stanford.smi.protegex.ezpal - EZPal Tab
>> > CONFIG: Loaded plugin edu.stanford.smi.protegex.facets_tab
>> > CONFIG: Loaded plugin edu.stanford.smi.protegex.instance_tree
>> > CONFIG: Loaded plugin edu.stanford.smi.protegex.owl.inference.pellet 
>> > - Protege Pellet Reasoner
>> > CONFIG: Loaded plugin edu.stanford.smi.protegex.prompt - PROMPT
>> >  Tab
>> > CONFIG: Loaded plugin edu.stanford.smi.protegex.umls_tab - UMLS Tab
>> > CONFIG: Loaded plugin edu.stanford.smi.protegex.wordnet - WordNet Tab
>> > CONFIG: Loaded plugin edu.stanford.smi.protegex.xml_tab - XML Tab
>> > CONFIG: Loaded plugin org.algernon - Algernon
>> > CONFIG: Loaded plugin se.liu.ida.JessTab - JessTab Plugin
>> > CONFIG: Loaded plugin uk.ac.iam.soton.akt.tgviztab - TGVizTab
>> > CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.debugger
>> > CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.manchesterowlsyntaxeditor
>> > CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.owldoc
>> > CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.owlindividualstab
>> > CONFIG: Loaded
>> >  plugin uk.ac.man.cs.mig.coode.owlviz
>> > CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.protege.wizard - Basic
>> Wizards
>> > CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.protege.wizard.owl - OWL
>> Wizards
>> > WARNING: [Local Folder Repository] The specified file must be a 
>> > directory. (\ontology\Error.owl) --
>> >  LocalFolderRepository.update()
>> > INFO: Loading triples
>> > INFO: Start processing ontology: 
>> > http://localhost:9999/ontology/MalfunctionRule.owl Time: Fri Dec 28 
>> > 01:32:56 CST 2007
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://swrl.stanford.edu/ontologies/built-ins/3.3/swrlx.owl (from 
>> > c:\protege\3\plugins\edu.stanford.smi.protegex.owl\swrlx.owl)
>> > INFO: [ProtegeOWLParser] Importing
>> http://localhost:9999/ontology/Error.owl
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://sqwrl.stanford.edu/ontologies/built-ins/3.4/sqwrl.owl (from
>> >  c:\protege\3\plugins\edu.stanford.smi.protegex.owl\sqwrl.owl)
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://swrl.stanford.edu/ontologies/3.3/swrla.owl (from 
>> > c:\protege\3\plugins\edu.stanford.smi.protegex.owl\swrla.owl)
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://swrl.stanford.edu/ontologies/built-ins/3.4/swrlm.owl (from 
>> > c:\protege\3\plugins\edu.stanford.smi.protegex.owl\swrlm.owl)
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://swrl.stanford.edu/ontologies/built-ins/3.3/tbox.owl (from 
>> > c:\protege\3\plugins\edu.stanford.smi.protegex.owl\tbox.owl)
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://swrl.stanford.edu/ontologies/built-ins/3.3/abox.owl (from 
>> > c:\protege\3\plugins\edu.stanford.smi.protegex.owl\abox.owl)
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl (from 
>> > c:\protege\3\plugins\edu.stanford.smi.protegex.owl\temporal.owl)
>> > INFO: [ProtegeOWLParser] Completed triple loading after 632 ms
>> > INFO: [TripleChangePostProcessor] Completed lists after 0 ms
>> > INFO: [TripleChangePostProcessor] Completed anonymous classes after 2
>> ms
>> > INFO: [TripleChangePostProcessor] Completed deprecated classes after 5
>> ms
>> > INFO: [TripleChangePostProcessor] Completed properties after 10 ms
>> > INFO: [TripleChangePostProcessor] Completed named classes after 6 ms
>> > INFO: ... Loading completed
>> >  after 765 ms
>> > Rule engine
>> >  'SWRLJessBridge' registered with the SWRLTab bridge.
>> > WARNING: [Local Folder Repository] The specified file must be a 
>> > directory. (\ontology\Device.owl) -- LocalFolderRepository.update()
>> > WARNING: [Local Folder Repository] The specified file must be a 
>> > directory. (\ontology\StateMachine.owl) -- 
>> > LocalFolderRepository.update()
>> > WARNING: [Local Folder Repository] The specified file must be a 
>> > directory. (\ontology\Hardware.owl) -- LocalFolderRepository.update()
>> > WARNING: [Local Folder Repository] The specified file must be a 
>> > directory. (\ontology\SoftwarePlatform.owl) -- 
>> > LocalFolderRepository.update()
>> > WARNING: [Local Folder Repository] The specified file must be a 
>> > directory. (\ontology\OperatingSystem.owl) -- 
>> > LocalFolderRepository.update()
>> > WARNING: [Local Folder Repository] The specified file must be a 
>> > directory. (\ontology\Java.owl) -- LocalFolderRepository.update()
>> > WARNING: [Local Folder Repository] The specified file must be a
>> directory.
>> >  (\ontology\DotNet.owl) -- LocalFolderRepository.update()
>> > WARNING: [Local Folder Repository] The specified file must be a 
>> > directory. (\ontology\Error.owl) -- LocalFolderRepository.update()
>> > INFO: Loading triples
>> > INFO: Start processing ontology: 
>> > http://localhost:9999/ontology/DeviceRule_Pig.owl Time: Fri Dec 28 
>> > 01:32:58 CST 2007
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://swrl.stanford.edu/ontologies/3.3/swrla.owl (from 
>> > c:\protege\3\plugins\edu.stanford.smi.protegex.owl\swrla.owl)
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://swrl.stanford.edu/ontologies/built-ins/3.3/tbox.owl (from
>> >  c:\protege\3\plugins\edu.stanford.smi.protegex.owl\tbox.owl)
>> > INFO:
>> >  [ProtegeOWLParser] Importing 
>> > http://sqwrl.stanford.edu/ontologies/built-ins/3.4/sqwrl.owl (from 
>> > c:\protege\3\plugins\edu.stanford.smi.protegex.owl\sqwrl.owl)
>> > INFO: [ProtegeOWLParser] Importing http://www.w3.org/2003/11/swrlb 
>> > (from c:\protege\3\plugins\edu.stanford.smi.protegex.owl\swrlb.owl)
>> > INFO: [ProtegeOWLParser] Importing http://www.w3.org/2003/11/swrl 
>> > (from c:\protege\3\plugins\edu.stanford.smi.protegex.owl\swrl.owl)
>> > WARNING: [ProtegeOWLParser] Warning: Ignoring namespace prefix 
>> > "ruleml" for existing prefix "swrl" -- 
>> > DefaultProtegeOWLParserLogger.logWarning()
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl (from 
>> > c:\protege\3\plugins\edu.stanford.smi.protegex.owl\temporal.owl)
>> > INFO: [ProtegeOWLParser] Importing
>> http://localhost:9999/ontology/Device.owl
>> > WARNING: [ProtegeOWLParser] Warning: Ignoring namespace prefix "p1" 
>> > for existing prefix "statemachine" -- 
>> > DefaultProtegeOWLParserLogger.logWarning()
>> > INFO: [ProtegeOWLParser] Importing
>> http://localhost:9999/ontology/Error.owl
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://localhost:9999/ontology/SoftwarePlatform.owl
>> > INFO: [ProtegeOWLParser]
>> >  Importing http://localhost:9999/ontology/DotNet.owl
>> > INFO: [ProtegeOWLParser] Importing
>> http://localhost:9999/ontology/Java.owl
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://localhost:9999/ontology/OperatingSystem.owl
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://localhost:9999/ontology/Hardware.owl
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://localhost:9999/ontology/StateMachine.owl
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://swrl.stanford.edu/ontologies/built-ins/3.3/abox.owl (from 
>> > c:\protege\3\plugins\edu.stanford.smi.protegex.owl\abox.owl)
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://swrl.stanford.edu/ontologies/built-ins/3.3/swrlx.owl (from 
>> > c:\protege\3\plugins\edu.stanford.smi.protegex.owl\swrlx.owl)
>> > INFO: [ProtegeOWLParser] Importing 
>> > http://swrl.stanford.edu/ontologies/built-ins/3.4/swrlm.owl (from 
>> > c:\protege\3\plugins\edu.stanford.smi.protegex.owl\swrlm.owl)
>> > Exception in thread "main" java.lang.OutOfMemoryError: Java heap space
>> >     at java.util.HashMap.<init>(HashMap.java:187)
>> >     at
>> >  java.util.HashMap.<init>(HashMap.java:199)
>> >     at java.util.LinkedHashMap.<init>(LinkedHashMap.java:172)
>> >     at 
>> >
>> edu.stanford.smi.protege.model.framestore.InMemoryFrameDb.<init>(Unknown 
>> > Source)
>> >     at 
>> >
>> edu.stanford.smi.protegex.owl.jena.triplestore.JenaTripleStoreModel.createTripleStore(Unknown 
>> > Source)
>> >     at 
>> >
>> edu.stanford.smi.protegex.owl.jena.parser.ProtegeOWLParser.runImport(Unknown 
>> > Source)
>> >     at 
>> >
>> edu.stanford.smi.protegex.owl.jena.parser.ProtegeOWLParser.processImports(Unknown 
>> > Source)
>> >     at 
>> >
>> edu.stanford.smi.protegex.owl.jena.parser.ProtegeOWLParser.loadTriples(Unknown 
>> > Source)
>> >     at 
>> > edu.stanford.smi.protegex.owl.jena.parser.ProtegeOWLParser.run(Unknown 
>> > Source)
>> >     at 
>> > edu.stanford.smi.protegex.owl.jena.parser.ProtegeOWLParser.run(Unknown 
>> > Source)
>> >     at
>> >  
>> > edu.stanford.smi.protegex.owl.jena.parser.ProtegeOWLParser.run(Unknown 
>> > Source)
>> >     at edu.stanford.smi.protegex.owl.jena.JenaOWLModel.load(Unknown
>> Source)
>> >     at 
>> >
>> edu.stanford.smi.protegex.owl.ProtegeOWL.createJenaOWLModelFromURI(Unknown 
>> > Source)
>> >     at 
>> >
>> com.eu.hydra.flamenco.ruleprocessing.RuleProcessing.loadOWL(RuleProcessing.java:83)
>> >     at 
>> >
>> com.eu.hydra.flamenco.ruleprocessing.RuleProcessing.<init>(RuleProcessing.java:43)
>> >     at 
>> >
>> com.eu.hydra.flamenco.systemdiagnosis.PigSystemRule.<init>(PigSystemRule.java:32)
>> >     at 
>> >
>> com.eu.hydra.flamenco.systemdiagnosis.PigSystemRule.main(PigSystemRule.java:55)
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >       
>> >
>> ____________________________________________________________________________________
>> > Looking for last minute shopping deals?
>> > Find them fast with Yahoo! Search.  
>> > http://tools.search.yahoo.com/newsearch/category.php?category=shopping
>> 
>> 
>> 
>> 
>> 
>> ------------------------------
>> 
>> Message: 2
>> Date: Fri, 28 Dec 2007 13:41:57 -0800
>> From: Martin O'Connor <martin.oconnor at stanford.edu>
>> Subject: Re: [protege-owl] Exception on SWRL Query (correction)
>> To: Ely Edison Matos <ely.matos at ufjf.edu.br>, 	User support for the
>> 	Protege-OWL editor <protege-owl at lists.stanford.edu>
>> Message-ID: <47756DA5.8030101 at stanford.edu>
>> Content-Type: text/plain; charset=ISO-8859-1; format=flowed
>> 
>> 
>> Have you run the ontology through the OWL validator [1] to determine 
>> that it is valid OWL DL? Exceptions like these are often caused by OWL 
>> Full constructs in the OWL file. Send me the OWL files if you cannot 
>> find the source of the problem.
>> 
>> Martin
>> 
>> [1] http://www.mygrid.org.uk/OWL/Validator
>> 
>> Ely Edison Matos wrote:
>> 
>> >Correcting the rule:
>> > Hello,
>> > I'm trying to run a simple SWRL query (Protege 3.4 build 122)
>> >
>> > imp:Unit(?x) -> sqwrl:select(?x)
>> >
>> > where imp: is a ontology with Named Classes (like Unit) imported by the
>> > current ontology (which has Individuals from Unit). Nothing happens at
>> GUI
>> > and at log window I have a Warning (below).
>> >
>> > Some light on this? Are there some problem on use SWRL Query with
>> imported
>> > ontologies?
>> >
>> > Thanks,
>> > Ely
>> >
>> >
>> > WARNING: Exception caught by default exception handler -- 
>> > java.lang.ClassCastException:
>> >edu.stanford.smi.protegex.owl.model.impl.DefaultOWLUnionClass cannot  be
>> >cast to edu.stanford.smi.protegex.owl.model.RDFSNamedClass          at
>> >
>> >edu.stanford.smi.protegex.owl.model.impl.AbstractOWLModel.getRDFSNamedClass(
>> >Unknown Source)  at
>> >edu.stanford.smi.protegex.owl.swrl.util.SWRLOWLUtil.getRDFSNamedClass
>> > (Unknown Source)  at
>> >edu.stanford.smi.protegex.owl.swrl.bridge.impl.AbstractSWRLRuleEngine
>> > Bridge.importOWLClass(Unknown Source)         at
>> > edu.stanford.smi.protegex.owl.swrl.bridge.impl.AbstractSWRLRuleEngine
>> > Bridge.importOWLClasses(Unknown Source)          at
>> > edu.stanford.smi.protegex.owl.swrl.bridge.impl.AbstractSWRLRuleEngine
>> > Bridge.importOWLPropertyAssertionAxioms(Unknown Source)          at
>> > edu.stanford.smi.protegex.owl.swrl.bridge.impl.AbstractSWRLRuleEngine
>> > Bridge.importOWLPropertyAssertionAxioms(Unknown Source)          at
>> > edu.stanford.smi.protegex.owl.swrl.bridge.impl.AbstractSWRLRuleEngine
>> > Bridge.importSWRLRulesAndOWLKnowledge(Unknown Source)          at
>> > edu.stanford.smi.protegex.owl.swrl.bridge.impl.AbstractSWRLRuleEngine
>> > Bridge.importSWRLRulesAndOWLKnowledge(Unknown Source)          at
>> > edu.stanford.smi.protegex.owl.swrl.bridge.impl.AbstractSWRLRuleEngine
>> > Bridge.runSQWRLQueries(Unknown Source)          at
>> > edu.stanford.smi.protegex.owl.swrl.sqwrl.ui.SQWRLQueryControlPanel$Ru
>> > nActionListener.actionPerformed(Unknown Source)          at
>> >
>> javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995)
>> >at
>> >
>> >javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318)
>> >at
>> > javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel
>> >.java:387)          at
>> > javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242 
>> )
>> >at
>> >
>> >javax.swing.plaf.basic.BasicButtonListener.mouseReleased(BasicButtonListener
>> >.java:236)         at
>> >
>> java.awt.AWTEventMulticaster.mouseReleased(AWTEventMulticaster.java:272)
>> >at java.awt.Component.processMouseEvent(Component.java:6100)         at
>> >javax.swing.JComponent.processMouseEvent(JComponent.java:3265)        
>> at
>> >java.awt.Component.processEvent(Component.java:5865)          at
>> >java.awt.Container.processEvent(Container.java:2058)          at
>> >java.awt.Component.dispatchEventImpl(Component.java:4472)
>> >         at java.awt.Container.dispatchEventImpl(Container.java:2116)
>> >at java.awt.Component.dispatchEvent(Component.java:4302)          at
>> > java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4322 )
>> >at
>> > java.awt.LightweightDispatcher.processMouseEvent(Container.java:3986)
>> >         at
>> >java.awt.LightweightDispatcher.dispatchEvent(Container.java:3916)
>> >         at java.awt.Container.dispatchEventImpl(Container.java:2102)
>> >         at java.awt.Window.dispatchEventImpl(Window.java:2440)
>> >         at java.awt.Component.dispatchEvent(Component.java:4302)
>> >         at java.awt.EventQueue.dispatchEvent(EventQueue.java:599)
>> >at
>> >
>> >java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java
>> >:273)         at
>> > java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.
>> >java:183)      at
>> >
>> >java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java
>> >:173)          at
>> > java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:168)
>> >at
>> > java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:160)
>> >at java.awt.EventDispatchThread.run(EventDispatchThread.java:121)
>> >
>> >_______________________________________________
>> >protege-owl mailing list
>> >protege-owl at lists.stanford.edu
>> >https://mailman.stanford.edu/mailman/listinfo/protege-owl
>> >
>> >Instructions for unsubscribing:
>> http://protege.stanford.edu/doc/faq.html#01a.03 
>> >
>> >  
>> >
>> 
>> 
>> 
>> ------------------------------
>> 
>> Message: 3
>> Date: Sat, 29 Dec 2007 00:36:48 -0300
>> From: "Ely Edison Matos" <ely.matos at ufjf.edu.br>
>> Subject: [protege-owl] SWRL owl files not found
>> To: <protege-owl at lists.stanford.edu>
>> Message-ID: <00bd01c849cc$0c188a30$0300a8c0 at illusions>
>> Content-Type: text/plain; charset="iso-8859-1"
>> 
>> Hello,
>> I'm using SWRLJessBridge over a example created with Protege 3.4 build
>> 122 and I'm finding:
>> 
>> SEVERE: Exception caught -- java.io.FileNotFoundException:
>> http://swrl.stanford.edu/ontologies/built-ins/3.4/swrlxml.owl
>> 
>> SEVERE: Exception caught -- java.io.FileNotFoundException:
>> http://swrl.stanford.edu/ontologies/built-ins/3.4/swrlm.owl
>> 
>> In spite of this messages, the rules are firing with Jess.
>> Browsing web address, I found that swrlxml.owl is stored as SWRLXML.OWL
>> and swrlm.owl is in the 3.3 directory...Just a warning, I don?t know the
>> consequences yet.
>> 
>> Ah, both the files are in the protege.owl plugin directory, then I don't
>> know if the messages are showed with Protege Editor.
>> 
>> Ely
>> 
>> 
>> 
>> -------------- next part --------------
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>> http://mailman.stanford.edu/pipermail/protege-owl/attachments/20071229/28620a32/attachment.htm 
>> 
>> ------------------------------
>> 
>> _______________________________________________
>> protege-owl mailing list
>> protege-owl at lists.stanford.edu
>> https://mailman.stanford.edu/mailman/listinfo/protege-owl
>> 
>> 
>> End of protege-owl Digest, Vol 17, Issue 121
>> ********************************************
> 
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