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[protege-owl] Problem with SWRLTab in Protege 3.3.1 and 3.4 beta

Martin O'Connor martin.oconnor at stanford.edu
Wed Jan 9 15:00:24 PST 2008


Only the 7.0 release version or later of Jess is supported [1]. The pre 
release version will not work.

Martin

[1] http://protege.cim3.net/cgi-bin/wiki.pl?SWRLJessTab#nid6RJ

Lorne Bouchard wrote:

> Hi there,
>
> I have recently been trying to use the SWRLTab in Protege 3.3.1 and 
> 3.4 beta and in both cases I get the same Java runtime error.
> Below you will find the log of a session, during which I create a new 
> project from the file " family.swrl.owl.xml" which was downloaded from 
> the Stanford sample ontology site. I also get the same error with the 
> "daycare.swrl.owl" file which is referenced on the same site (the file 
> was downloaded from the University of Wisconsin site).
>
> I am using the "Jess Version 7.0b6 3/13/2006" jar file which is stored 
> in owl plugins directory.
>
> Have I missed something or am I doing something wrong?
>
> Thanks for your help.
>
> Cheers!
>
> - Lorne
>
> ------------------------------
> ---------------------
> Lorne H. Bouchard
> Professeur associé
> Département d'informatique
> Université du Québec à Montréal
>
> tél.: (514)-488-5226
> mél : Bouchard.Lorne_H at uqam.ca <mailto:Bouchard.Lorne_H at uqam.ca>
>         Lorne.Bouchard at gmail.com <mailto:Lorne.Bouchard at gmail.com>
>
> "May the source always be with you,
>  even if some assembly is required."
>
> ------------------------------------------------------------------------------------------------------------ 
>
> cwd: C:\Program Files\Protege_3.4_beta\
> cmd: "C:\Program Files\Protege_3.4_beta\jre\bin\java.exe" 
> -Xms209715200 -Xmx209715200 -classpath "C:\Prog
> ram Files\Protege_3.4_beta\protege.jar;C:\Program 
> Files\Protege_3.4_beta\looks- 2.1.3.jar;C:\Program Files
> \Protege_3.4_beta\unicode_panel.jar;C:\Program 
> Files\Protege_3.4_beta\driver.jar;C:\Program Files\Protege
> _3.4_beta\driver0.jar;C:\Program 
> Files\Protege_3.4_beta\driver1.jar;C:\Program Files\Protege_3.4_beta\dri
> ver2.jar;C:\Program 
> Files\Protege_3.4_beta\plugins\edu.stanford.smi.protegex.changes\change-model.jar;C:\
> Program Files\Protege_3.4_beta\lax.jar;" com.zerog.lax.LAX "C:/Program 
> Files/Protege_3.4_beta/Protege.lax
> " "C:/Documents and Settings/lhb/Local Settings/Temp/lax25.tmp"
> CONFIG: Protege 3.4 Build 125, JVM 1.5.0_11-b03, memory=208M, Windows 
> XP, encoding=UTF-8, language=en, co
> untry=CA
> CONFIG: Loaded plugin edu.stanford.smi.protegex.owl - OWL Plugin
> CONFIG: Loaded plugin ca.uvic.cs.chisel.jambalaya - Jambalaya
> CONFIG: Loaded plugin dfki.protege.ontoviz
> CONFIG: Loaded plugin edu.stanford.smi.protegex.rdf_backend - RDF Backend
> CONFIG: Loaded plugin edu.stanford.smi.protegex.changes - Changes tab
> CONFIG: Loaded plugin edu.stanford.smi.protegex.chatPlugin
> CONFIG: Loaded plugin edu.stanford.smi.protege.collab - Collaborative 
> Protege
> CONFIG: Loaded plugin edu.stanford.smi.protege.script - Script Plugin
> CONFIG: Loaded plugin edu.stanford.smi.protegex.standard_extensions - 
> Graph Widget, Table Widget
> CONFIG: Loaded plugin edu.stanford.smi.protege.stringsearch - String 
> Search Tab
> CONFIG: Loaded plugin edu.stanford.smi.protegex.datamaster - 
> DataMaster Tab
> CONFIG: Loaded plugin edu.stanford.smi.protegex.pal_tabs - PAL Tabs
> CONFIG: Loaded plugin edu.stanford.smi.protegex.ezpal - EZPal Tab
> CONFIG: Loaded plugin edu.stanford.smi.protegex.facets_tab
> CONFIG: Loaded plugin edu.stanford.smi.protegex.instance_tree
> CONFIG: Loaded plugin edu.stanford.smi.protegex.owl.inference.pellet - 
> Protege Pellet Reasoner
> CONFIG: Loaded plugin edu.stanford.smi.protegex.prompt - PROMPT Tab
> CONFIG: Loaded plugin edu.stanford.smi.protegex.umls_tab - UMLS Tab
> CONFIG: Loaded plugin edu.stanford.smi.protegex.wordnet - WordNet Tab
> CONFIG: Loaded plugin edu.stanford.smi.protegex.xml_tab - XML Tab
> CONFIG: Loaded plugin org.algernon - Algernon
> CONFIG: Loaded plugin se.liu.ida.JessTab - JessTab Plugin
> CONFIG: Loaded plugin uk.ac.iam.soton.akt.tgviztab - TGVizTab
> CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.debugger
> CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.manchesterowlsyntaxeditor
> CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.owldoc
> CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.owlindividualstab
> CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.owlviz
> CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.protege.wizard - Basic 
> Wizards
> CONFIG: Loaded plugin uk.ac.man.cs.mig.coode.protege.wizard.owl - OWL 
> Wizards
> WARNING: [Repository Manager] Could not find repository file: 
> file:/C:/Documents%20and%20Settings/lhb/Des
> ktop/Semantic%20web%20tutorial%20MCETECH'08/family.swrl.owl.repository 
> -- RepositoryFileManager.loadRepos
> itoriesFromURI()
> INFO: Loading triples
> INFO: Start processing ontology: 
> file:/C:/Documents%20and%20Settings/lhb/Desktop/Semantic%20web%20tutoria
> l%20MCETECH'08/family.swrl.owl.xml Time: Wed Jan 09 11:15:03 EST 2008
> INFO: [ProtegeOWLParser] Importing http://www.w3.org/2003/11/swrl 
> (from C:\Program Files\Protege_3.4_beta
> \plugins\edu.stanford.smi.protegex.owl\swrl.owl)
> WARNING: [ProtegeOWLParser] Warning: Ignoring namespace prefix 
> "ruleml" for existing prefix "swrl" -- Def
> aultProtegeOWLParserLogger.logWarning ()
> INFO: [ProtegeOWLParser] Importing http://www.w3.org/2003/11/swrlb 
> (from C:\Program Files\Protege_3.4_bet
> a\plugins\edu.stanford.smi.protegex.owl\swrlb.owl)
> INFO: [ProtegeOWLParser] Importing 
> http://swrl.stanford.edu/ontologies/3.3/swrla.owl (from C:\Program Fil
> es\Protege_3.4_beta\plugins\edu.stanford.smi.protegex.owl\swrla.owl)
> INFO: [ProtegeOWLParser] Importing 
> http://swrl.stanford.edu/ontologies/built-ins/3.3/temporal.owl (from C
> :\Program 
> Files\Protege_3.4_beta\plugins\edu.stanford.smi.protegex.owl\temporal.owl) 
>
> INFO: [ProtegeOWLParser] Importing 
> http://swrl.stanford.edu/ontologies/built-ins/3.3/abox.owl (from C:\Pr
> ogram 
> Files\Protege_3.4_beta\plugins\edu.stanford.smi.protegex.owl\abox.owl)
> INFO: [ProtegeOWLParser] Importing 
> http://swrl.stanford.edu/ontologies/built-ins/3.3/tbox.owl (from C:\Pr
> ogram 
> Files\Protege_3.4_beta\plugins\edu.stanford.smi.protegex.owl\tbox.owl)
> INFO: [ProtegeOWLParser] Importing 
> http://swrl.stanford.edu/ontologies/built-ins/3.3/swrlx.owl (from C:\P
> rogram 
> Files\Protege_3.4_beta\plugins\edu.stanford.smi.protegex.owl\swrlx.owl)
> INFO: [ProtegeOWLParser] Importing 
> http://swrl.stanford.edu/ontologies/built-ins/3.3/query.owl (from C:\P
> rogram 
> Files\Protege_3.4_beta\plugins\edu.stanford.smi.protegex.owl\query.owl)
> INFO: [ProtegeOWLParser] Completed triple loading after 1266 ms
> INFO: [TripleChangePostProcessor] Completed lists after 0 ms
> INFO: [TripleChangePostProcessor] Completed anonymous classes after 16 ms
> INFO: [TripleChangePostProcessor] Completed deprecated classes after 0 ms
> INFO: [TripleChangePostProcessor] Completed properties after 31 ms
> INFO: [TripleChangePostProcessor] Completed named classes after 31 ms
> INFO: ... Loading completed after 1703 ms
> Rule engine 'SWRLJessBridge' registered with the SWRLTab bridge.
> Plugin 'SWRLJessTab' registered with the SWRLTab plugin manager.
> Plugin 'SQWRLQueryTab' registered with the SWRLTab plugin manager.
> Protege Wizards v1.0 beta build 14
> Loaded OWL wizards library
> WARNING: Exception caught by default exception handler -- 
> java.lang.NoSuchMethodError: jess.Rete.removeFa
> cts(Ljava/lang/String;)V
>         at 
> edu.stanford.smi.protegex.owl.swrl.bridge.jess.SWRLJessBridge.defineRule 
> (SWRLJessBridge.java:1
> 02)
>         at 
> edu.stanford.smi.protegex.owl.swrl.bridge.impl.AbstractSWRLRuleEngineBridge.exportSWRLRule(Unk
> nown Source)
>         at 
> edu.stanford.smi.protegex.owl.swrl.bridge.impl.AbstractSWRLRuleEngineBridge.exportSWRLRules 
> (Un
> known Source)
>         at 
> edu.stanford.smi.protegex.owl.swrl.bridge.impl.AbstractSWRLRuleEngineBridge.exportSWRLRulesAnd
> OWLKnowledge(Unknown Source)
>         at 
> edu.stanford.smi.protegex.owl.swrl.bridge.impl.AbstractSWRLRuleEngineBridge.importSWRLRulesAnd 
>
> OWLKnowledge(Unknown Source)
>         at 
> edu.stanford.smi.protegex.owl.swrl.bridge.impl.AbstractSWRLRuleEngineBridge.importSWRLRulesAnd
> OWLKnowledge(Unknown Source)
>         at 
> edu.stanford.smi.protegex.owl.swrl.bridge.jess.ui.JessControlPanel$ImportActionListener.action 
>
> Performed(JessControlPanel.java:130)
>         at javax.swing.AbstractButton.fireActionPerformed(Unknown Source)
>         at javax.swing.AbstractButton$Handler.actionPerformed(Unknown 
> Source)
>         at javax.swing.DefaultButtonModel.fireActionPerformed (Unknown 
> Source)
>         at javax.swing.DefaultButtonModel.setPressed(Unknown Source)
>         at 
> javax.swing.plaf.basic.BasicButtonListener.mouseReleased(Unknown Source)
>         at java.awt.AWTEventMulticaster.mouseReleased (Unknown Source)
>         at java.awt.Component.processMouseEvent(Unknown Source)
>         at javax.swing.JComponent.processMouseEvent(Unknown Source)
>         at java.awt.Component.processEvent(Unknown Source)
>         at java.awt.Container.processEvent(Unknown Source)
>         at java.awt.Component.dispatchEventImpl(Unknown Source)
>         at java.awt.Container.dispatchEventImpl(Unknown Source)
>         at java.awt.Component.dispatchEvent (Unknown Source)
>         at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown 
> Source)
>         at java.awt.LightweightDispatcher.processMouseEvent(Unknown 
> Source)
>         at java.awt.LightweightDispatcher.dispatchEvent (Unknown Source)
>         at java.awt.Container.dispatchEventImpl(Unknown Source)
>         at java.awt.Window.dispatchEventImpl(Unknown Source)
>         at java.awt.Component.dispatchEvent(Unknown Source)
>         at java.awt.EventQueue.dispatchEvent(Unknown Source)
>         at 
> java.awt.EventDispatchThread.pumpOneEventForHierarchy(Unknown Source)
>         at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown 
> Source)
>         at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
>         at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
>         at java.awt.EventDispatchThread.run(Unknown Source)
>
>------------------------------------------------------------------------
>
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